STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0386Conserved hypothetical protein. (518 aa)    
Predicted Functional Partners:
sync_0385
Uncharacterized HesB family conserved protein.
       0.716
sync_0963
Conserved hypothetical protein.
  
     0.708
sync_0387
Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Identified by match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
       0.661
sync_0291
Conserved hypothetical protein.
  
     0.650
sync_1990
Conserved hypothetical protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
  
     0.617
sync_0678
Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family.
  
     0.613
sync_1500
Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family.
  
     0.609
sync_1378
N-acetylmuramoyl-L-alanine amidase (family 2); Identified by match to protein family HMM PF01510.
 
     0.607
sync_1501
Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family.
  
     0.606
sync_1406
Conserved hypothetical protein.
 
     0.602
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.