sync_0388 protein (Synechococcus sp. CC9311)

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second shell of interactors

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

sync_0388

Uncharacterized ycii family conserved protein; Identified by match to protein family HMM PF03795. (102 aa)

Predicted Functional Partners:

sync_0387

0.818

sync_1102

0.660

sync_2604

0.595

sync_0297

0.591

sync_2544

0.559

sync_1825

0.535

sync_2228

0.513

rpmH

0.508

sync_0733

0.486

sync_0386

0.479

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpmH	sync_0388	sync_2098	sync_0388	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	Uncharacterized ycii family conserved protein; Identified by match to protein family HMM PF03795.	0.508
rpmH	sync_0733	sync_2098	sync_0733	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	Uncharacterized secreted or membrane protein.	0.475
rpmH	sync_2228	sync_2098	sync_2228	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	CpeY protein; Identified by match to protein family HMM PF03130.	0.720
sync_0297	sync_0388	sync_0297	sync_0388	Conserved hypothetical protein.	Uncharacterized ycii family conserved protein; Identified by match to protein family HMM PF03795.	0.591
sync_0297	sync_0733	sync_0297	sync_0733	Conserved hypothetical protein.	Uncharacterized secreted or membrane protein.	0.686
sync_0297	sync_1102	sync_0297	sync_1102	Conserved hypothetical protein.	Uncharacterized conserved membrane protein; Identified by match to protein family HMM PF07681.	0.519
sync_0297	sync_2544	sync_0297	sync_2544	Conserved hypothetical protein.	Putative membrane protein; Identified by similarity to GB:CAE20354.1.	0.698
sync_0386	sync_0387	sync_0386	sync_0387	Conserved hypothetical protein.	Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Identified by match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	0.661
sync_0386	sync_0388	sync_0386	sync_0388	Conserved hypothetical protein.	Uncharacterized ycii family conserved protein; Identified by match to protein family HMM PF03795.	0.479
sync_0387	sync_0386	sync_0387	sync_0386	Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Identified by match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	Conserved hypothetical protein.	0.661
sync_0387	sync_0388	sync_0387	sync_0388	Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Identified by match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	Uncharacterized ycii family conserved protein; Identified by match to protein family HMM PF03795.	0.818
sync_0388	rpmH	sync_0388	sync_2098	Uncharacterized ycii family conserved protein; Identified by match to protein family HMM PF03795.	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	0.508
sync_0388	sync_0297	sync_0388	sync_0297	Uncharacterized ycii family conserved protein; Identified by match to protein family HMM PF03795.	Conserved hypothetical protein.	0.591
sync_0388	sync_0386	sync_0388	sync_0386	Uncharacterized ycii family conserved protein; Identified by match to protein family HMM PF03795.	Conserved hypothetical protein.	0.479
sync_0388	sync_0387	sync_0388	sync_0387	Uncharacterized ycii family conserved protein; Identified by match to protein family HMM PF03795.	Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Identified by match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	0.818
sync_0388	sync_0733	sync_0388	sync_0733	Uncharacterized ycii family conserved protein; Identified by match to protein family HMM PF03795.	Uncharacterized secreted or membrane protein.	0.486
sync_0388	sync_1102	sync_0388	sync_1102	Uncharacterized ycii family conserved protein; Identified by match to protein family HMM PF03795.	Uncharacterized conserved membrane protein; Identified by match to protein family HMM PF07681.	0.660
sync_0388	sync_1825	sync_0388	sync_1825	Uncharacterized ycii family conserved protein; Identified by match to protein family HMM PF03795.	Uncharacterized protein.	0.535
sync_0388	sync_2228	sync_0388	sync_2228	Uncharacterized ycii family conserved protein; Identified by match to protein family HMM PF03795.	CpeY protein; Identified by match to protein family HMM PF03130.	0.513
sync_0388	sync_2544	sync_0388	sync_2544	Uncharacterized ycii family conserved protein; Identified by match to protein family HMM PF03795.	Putative membrane protein; Identified by similarity to GB:CAE20354.1.	0.559