sync_0454 protein (Synechococcus sp. CC9311)

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Score

sync_0454

Identified by match to protein family HMM PF00733; match to protein family HMM TIGR00268. (275 aa)

Predicted Functional Partners:

sync_0783

0.971

sync_2051

0.951

nth

0.700

cobO-1

0.606

sync_2347

0.539

Oxidoreductase

0.538

sync_0455

0.477

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Oxidoreductase	sync_0454	sync_2120	sync_0454	Oxidoreductase, Aldo/keto reductase family; Identified by match to protein family HMM PF00037; match to protein family HMM PF00248.	Identified by match to protein family HMM PF00733; match to protein family HMM TIGR00268.	0.538
Oxidoreductase	sync_0783	sync_2120	sync_0783	Oxidoreductase, Aldo/keto reductase family; Identified by match to protein family HMM PF00037; match to protein family HMM PF00248.	Putative circadian phase modifier CpmA homolog.	0.488
Oxidoreductase	sync_2051	sync_2120	sync_2051	Oxidoreductase, Aldo/keto reductase family; Identified by match to protein family HMM PF00037; match to protein family HMM PF00248.	Conserved hypothetical protein TIGR00299; Identified by match to protein family HMM PF01969; match to protein family HMM TIGR00299; Belongs to the LarC family.	0.483
cobO-1	sync_0454	sync_0453	sync_0454	cob(I)alamin adenosyltransferase; Identified by match to protein family HMM PF02572.	Identified by match to protein family HMM PF00733; match to protein family HMM TIGR00268.	0.606
nth	sync_0454	sync_1850	sync_0454	Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.	Identified by match to protein family HMM PF00733; match to protein family HMM TIGR00268.	0.700
sync_0454	Oxidoreductase	sync_0454	sync_2120	Identified by match to protein family HMM PF00733; match to protein family HMM TIGR00268.	Oxidoreductase, Aldo/keto reductase family; Identified by match to protein family HMM PF00037; match to protein family HMM PF00248.	0.538
sync_0454	cobO-1	sync_0454	sync_0453	Identified by match to protein family HMM PF00733; match to protein family HMM TIGR00268.	cob(I)alamin adenosyltransferase; Identified by match to protein family HMM PF02572.	0.606
sync_0454	nth	sync_0454	sync_1850	Identified by match to protein family HMM PF00733; match to protein family HMM TIGR00268.	Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.	0.700
sync_0454	sync_0455	sync_0454	sync_0455	Identified by match to protein family HMM PF00733; match to protein family HMM TIGR00268.	Glutamate decarboxylase; Identified by match to protein family HMM PF00282; match to protein family HMM TIGR01788; Belongs to the group II decarboxylase family.	0.477
sync_0454	sync_0783	sync_0454	sync_0783	Identified by match to protein family HMM PF00733; match to protein family HMM TIGR00268.	Putative circadian phase modifier CpmA homolog.	0.971
sync_0454	sync_2051	sync_0454	sync_2051	Identified by match to protein family HMM PF00733; match to protein family HMM TIGR00268.	Conserved hypothetical protein TIGR00299; Identified by match to protein family HMM PF01969; match to protein family HMM TIGR00299; Belongs to the LarC family.	0.951
sync_0454	sync_2347	sync_0454	sync_2347	Identified by match to protein family HMM PF00733; match to protein family HMM TIGR00268.	Oxidoreductase, aldo/keto reductase family protein; Identified by match to protein family HMM PF00248.	0.539
sync_0455	sync_0454	sync_0455	sync_0454	Glutamate decarboxylase; Identified by match to protein family HMM PF00282; match to protein family HMM TIGR01788; Belongs to the group II decarboxylase family.	Identified by match to protein family HMM PF00733; match to protein family HMM TIGR00268.	0.477
sync_0783	Oxidoreductase	sync_0783	sync_2120	Putative circadian phase modifier CpmA homolog.	Oxidoreductase, Aldo/keto reductase family; Identified by match to protein family HMM PF00037; match to protein family HMM PF00248.	0.488
sync_0783	sync_0454	sync_0783	sync_0454	Putative circadian phase modifier CpmA homolog.	Identified by match to protein family HMM PF00733; match to protein family HMM TIGR00268.	0.971
sync_0783	sync_2051	sync_0783	sync_2051	Putative circadian phase modifier CpmA homolog.	Conserved hypothetical protein TIGR00299; Identified by match to protein family HMM PF01969; match to protein family HMM TIGR00299; Belongs to the LarC family.	0.895
sync_0783	sync_2347	sync_0783	sync_2347	Putative circadian phase modifier CpmA homolog.	Oxidoreductase, aldo/keto reductase family protein; Identified by match to protein family HMM PF00248.	0.514
sync_2051	Oxidoreductase	sync_2051	sync_2120	Conserved hypothetical protein TIGR00299; Identified by match to protein family HMM PF01969; match to protein family HMM TIGR00299; Belongs to the LarC family.	Oxidoreductase, Aldo/keto reductase family; Identified by match to protein family HMM PF00037; match to protein family HMM PF00248.	0.483
sync_2051	sync_0454	sync_2051	sync_0454	Conserved hypothetical protein TIGR00299; Identified by match to protein family HMM PF01969; match to protein family HMM TIGR00299; Belongs to the LarC family.	Identified by match to protein family HMM PF00733; match to protein family HMM TIGR00268.	0.951
sync_2051	sync_0783	sync_2051	sync_0783	Conserved hypothetical protein TIGR00299; Identified by match to protein family HMM PF01969; match to protein family HMM TIGR00299; Belongs to the LarC family.	Putative circadian phase modifier CpmA homolog.	0.895