STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0470Possible Pex protein. (127 aa)    
Predicted Functional Partners:
sync_2077
Conserved hypothetical protein; Identified by similarity to GB:CAE20647.1.
  
     0.749
sync_1296
Conserved hypothetical protein; Identified by similarity to GB:BAC09630.1.
  
     0.729
sync_1632
Conserved hypothetical protein.
  
     0.723
sync_0469
Conserved hypothetical protein; Identified by similarity to GB:CAE21879.1.
       0.698
sync_1990
Conserved hypothetical protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
  
     0.698
sync_1265
Ribonucleotide reductase (Class II); Identified by match to protein family HMM TIGR02505.
  
     0.689
sync_2570
TPR-repeat protein, specific for cyanobacteria.
  
     0.684
sync_0468
Possible N-acetylmuramoyl-L-alanine amidase.
       0.665
sync_2099
Uncharacterized protein.
  
     0.659
thyX
Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
  
     0.641
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.