cpcF protein (Synechococcus sp. CC9311) - STRING interaction network

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Score

cpcF

Phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit; Identified by match to protein family HMM PF03130. (209 aa)

Predicted Functional Partners:

cpcE

0.999

cpcA

0.993

cpcB

0.991

cpcG1

0.980

sync_0515

0.976

sync_0516

0.976

sync_1249

0.976

cpcT

0.974

cpcS-4

0.829

apcA

0.820

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
apcA	cpcA	sync_2323	sync_0488	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338.	0.949
apcA	cpcB	sync_2323	sync_0489	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Phycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01339.	0.938
apcA	cpcE	sync_2323	sync_0486	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit; Identified by match to protein family HMM PF03130.	0.853
apcA	cpcF	sync_2323	sync_0485	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit; Identified by match to protein family HMM PF03130.	0.820
apcA	cpcG1	sync_2323	sync_2488	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Phycobilisome rod-core linker polypeptide cpcG1; Identified by similarity to SP:P29986; match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.968
apcA	cpcS-4	sync_2323	sync_2487	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.	0.904
apcA	cpcT	sync_2323	sync_0487	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Protein of unknown function (DUF1001) superfamily protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.	0.855
apcA	sync_0515	sync_2323	sync_0515	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Possible phycobilisome rod-core linker polypeptide (L-RC 28.5); Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.773
apcA	sync_0516	sync_2323	sync_0516	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Possible phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.900
apcA	sync_1249	sync_2323	sync_1249	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Possible phycobilisome rod-core linker polypeptide (L-RC 28.5); Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.774
cpcA	apcA	sync_0488	sync_2323	Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338.	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	0.949
cpcA	cpcB	sync_0488	sync_0489	Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338.	Phycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01339.	0.999
cpcA	cpcE	sync_0488	sync_0486	Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit; Identified by match to protein family HMM PF03130.	0.996
cpcA	cpcF	sync_0488	sync_0485	Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit; Identified by match to protein family HMM PF03130.	0.993
cpcA	cpcG1	sync_0488	sync_2488	Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338.	Phycobilisome rod-core linker polypeptide cpcG1; Identified by similarity to SP:P29986; match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.996
cpcA	cpcS-4	sync_0488	sync_2487	Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338.	Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.	0.889
cpcA	cpcT	sync_0488	sync_0487	Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338.	Protein of unknown function (DUF1001) superfamily protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.	0.950
cpcA	sync_0515	sync_0488	sync_0515	Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338.	Possible phycobilisome rod-core linker polypeptide (L-RC 28.5); Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.976
cpcA	sync_0516	sync_0488	sync_0516	Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338.	Possible phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.990
cpcA	sync_1249	sync_0488	sync_1249	Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338.	Possible phycobilisome rod-core linker polypeptide (L-RC 28.5); Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.976