cpcF protein (Synechococcus sp. CC9311) - STRING interaction network

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Score

cpcF

Phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit; Identified by match to protein family HMM PF03130. (209 aa)

Predicted Functional Partners:

cpcE

0.999

cpcA

0.995

cpcB

0.994

cpcG1

0.984

cpcT

0.979

sync_0515

0.976

sync_0516

0.976

sync_1249

0.976

apcD

0.868

apcB-2

0.855

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
apcB-2	apcD	sync_2324	sync_1341	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	0.995
apcB-2	cpcA	sync_2324	sync_0488	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338.	0.965
apcB-2	cpcB	sync_2324	sync_0489	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Phycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01339.	0.956
apcB-2	cpcE	sync_2324	sync_0486	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit; Identified by match to protein family HMM PF03130.	0.899
apcB-2	cpcF	sync_2324	sync_0485	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit; Identified by match to protein family HMM PF03130.	0.855
apcB-2	cpcG1	sync_2324	sync_2488	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Phycobilisome rod-core linker polypeptide cpcG1; Identified by similarity to SP:P29986; match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.993
apcB-2	cpcT	sync_2324	sync_0487	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Protein of unknown function (DUF1001) superfamily protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.	0.891
apcB-2	sync_0515	sync_2324	sync_0515	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Possible phycobilisome rod-core linker polypeptide (L-RC 28.5); Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.771
apcB-2	sync_0516	sync_2324	sync_0516	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Possible phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.872
apcB-2	sync_1249	sync_2324	sync_1249	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Possible phycobilisome rod-core linker polypeptide (L-RC 28.5); Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.773
apcD	apcB-2	sync_1341	sync_2324	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	0.995
apcD	cpcA	sync_1341	sync_0488	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338.	0.961
apcD	cpcB	sync_1341	sync_0489	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Phycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01339.	0.955
apcD	cpcE	sync_1341	sync_0486	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit; Identified by match to protein family HMM PF03130.	0.891
apcD	cpcF	sync_1341	sync_0485	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit; Identified by match to protein family HMM PF03130.	0.868
apcD	cpcG1	sync_1341	sync_2488	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Phycobilisome rod-core linker polypeptide cpcG1; Identified by similarity to SP:P29986; match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.994
apcD	cpcT	sync_1341	sync_0487	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Protein of unknown function (DUF1001) superfamily protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.	0.845
apcD	sync_0515	sync_1341	sync_0515	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Possible phycobilisome rod-core linker polypeptide (L-RC 28.5); Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.774
apcD	sync_0516	sync_1341	sync_0516	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Possible phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.888
apcD	sync_1249	sync_1341	sync_1249	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Possible phycobilisome rod-core linker polypeptide (L-RC 28.5); Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.774