cpaB-1 protein (Synechococcus sp. CC9311) - STRING interaction network

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Score

cpaB-1

C-phycoerythrin class I beta chain; Identified by match to protein family HMM PF00502. (184 aa)

Predicted Functional Partners:

cpaA-1

0.996

apcE

0.936

apcC

0.925

cpcA

0.922

cpaA-2

0.920

cpcG1

0.916

cpaB-2

0.902

pebA

0.900

cpeC

0.891

sync_0517

0.883

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
apcC	apcE	sync_2325	sync_2321	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	0.999
apcC	cpaA-1	sync_2325	sync_0496	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.	C-phycoerythrin class I alpha chain; Identified by match to protein family HMM PF00502.	0.921
apcC	cpaA-2	sync_2325	sync_0504	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.	C-phycoerythrin class II alpha chain; Identified by match to protein family HMM PF00502.	0.920
apcC	cpaB-1	sync_2325	sync_0495	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.	C-phycoerythrin class I beta chain; Identified by match to protein family HMM PF00502.	0.925
apcC	cpaB-2	sync_2325	sync_0505	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.	C-phycoerythrin class II beta chain; Identified by match to protein family HMM PF00502.	0.921
apcC	cpcA	sync_2325	sync_0488	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.	Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338.	0.995
apcC	cpcG1	sync_2325	sync_2488	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.	Phycobilisome rod-core linker polypeptide cpcG1; Identified by similarity to SP:P29986; match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.993
apcC	cpeC	sync_2325	sync_0513	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.	Phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; match to protein family HMM PF01383; Belongs to the phycobilisome linker protein family.	0.921
apcC	pebA	sync_2325	sync_0491	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.	15,16-dihydrobiliverdin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of biliverdin IX-alpha at the C15 methine bridge; Belongs to the HY2 family.	0.514
apcC	sync_0517	sync_2325	sync_0517	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.	Possible Phycobilisome polypeptide; Identified by match to protein family HMM PF00502.	0.925
apcE	apcC	sync_2321	sync_2325	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.	0.999
apcE	cpaA-1	sync_2321	sync_0496	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	C-phycoerythrin class I alpha chain; Identified by match to protein family HMM PF00502.	0.920
apcE	cpaA-2	sync_2321	sync_0504	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	C-phycoerythrin class II alpha chain; Identified by match to protein family HMM PF00502.	0.916
apcE	cpaB-1	sync_2321	sync_0495	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	C-phycoerythrin class I beta chain; Identified by match to protein family HMM PF00502.	0.936
apcE	cpaB-2	sync_2321	sync_0505	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	C-phycoerythrin class II beta chain; Identified by match to protein family HMM PF00502.	0.918
apcE	cpcA	sync_2321	sync_0488	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338.	0.994
apcE	cpcG1	sync_2321	sync_2488	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Phycobilisome rod-core linker polypeptide cpcG1; Identified by similarity to SP:P29986; match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.963
apcE	cpeC	sync_2321	sync_0513	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; match to protein family HMM PF01383; Belongs to the phycobilisome linker protein family.	0.654
apcE	sync_0517	sync_2321	sync_0517	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Possible Phycobilisome polypeptide; Identified by match to protein family HMM PF00502.	0.920
cpaA-1	apcC	sync_0496	sync_2325	C-phycoerythrin class I alpha chain; Identified by match to protein family HMM PF00502.	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.	0.921