Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cpaA-1 | cpaA-2 | sync_0496 | sync_0504 | C-phycoerythrin class I alpha chain; Identified by match to protein family HMM PF00502. | C-phycoerythrin class II alpha chain; Identified by match to protein family HMM PF00502. | 0.903 |
| cpaA-1 | cpaB-1 | sync_0496 | sync_0495 | C-phycoerythrin class I alpha chain; Identified by match to protein family HMM PF00502. | C-phycoerythrin class I beta chain; Identified by match to protein family HMM PF00502. | 0.994 |
| cpaA-1 | cpaB-2 | sync_0496 | sync_0505 | C-phycoerythrin class I alpha chain; Identified by match to protein family HMM PF00502. | C-phycoerythrin class II beta chain; Identified by match to protein family HMM PF00502. | 0.911 |
| cpaA-1 | cpcB | sync_0496 | sync_0489 | C-phycoerythrin class I alpha chain; Identified by match to protein family HMM PF00502. | Phycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01339. | 0.776 |
| cpaA-1 | cpcE | sync_0496 | sync_0486 | C-phycoerythrin class I alpha chain; Identified by match to protein family HMM PF00502. | Phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit; Identified by match to protein family HMM PF03130. | 0.797 |
| cpaA-1 | cpcS-2 | sync_0496 | sync_0510 | C-phycoerythrin class I alpha chain; Identified by match to protein family HMM PF00502. | Phycoerythrin linker protein CpeS; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | 0.783 |
| cpaA-1 | cpcT-2 | sync_0496 | sync_0509 | C-phycoerythrin class I alpha chain; Identified by match to protein family HMM PF00502. | Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | 0.787 |
| cpaA-1 | cpeD-1 | sync_0496 | sync_0511 | C-phycoerythrin class I alpha chain; Identified by match to protein family HMM PF00502. | Possible phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family. | 0.774 |
| cpaA-1 | sync_0517 | sync_0496 | sync_0517 | C-phycoerythrin class I alpha chain; Identified by match to protein family HMM PF00502. | Possible Phycobilisome polypeptide; Identified by match to protein family HMM PF00502. | 0.904 |
| cpaA-2 | cpaA-1 | sync_0504 | sync_0496 | C-phycoerythrin class II alpha chain; Identified by match to protein family HMM PF00502. | C-phycoerythrin class I alpha chain; Identified by match to protein family HMM PF00502. | 0.903 |
| cpaA-2 | cpaB-1 | sync_0504 | sync_0495 | C-phycoerythrin class II alpha chain; Identified by match to protein family HMM PF00502. | C-phycoerythrin class I beta chain; Identified by match to protein family HMM PF00502. | 0.918 |
| cpaA-2 | cpaB-2 | sync_0504 | sync_0505 | C-phycoerythrin class II alpha chain; Identified by match to protein family HMM PF00502. | C-phycoerythrin class II beta chain; Identified by match to protein family HMM PF00502. | 0.966 |
| cpaA-2 | cpcB | sync_0504 | sync_0489 | C-phycoerythrin class II alpha chain; Identified by match to protein family HMM PF00502. | Phycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01339. | 0.723 |
| cpaA-2 | cpcE | sync_0504 | sync_0486 | C-phycoerythrin class II alpha chain; Identified by match to protein family HMM PF00502. | Phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit; Identified by match to protein family HMM PF03130. | 0.755 |
| cpaA-2 | cpcS-2 | sync_0504 | sync_0510 | C-phycoerythrin class II alpha chain; Identified by match to protein family HMM PF00502. | Phycoerythrin linker protein CpeS; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | 0.781 |
| cpaA-2 | cpcT-2 | sync_0504 | sync_0509 | C-phycoerythrin class II alpha chain; Identified by match to protein family HMM PF00502. | Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | 0.785 |
| cpaA-2 | cpeD-1 | sync_0504 | sync_0511 | C-phycoerythrin class II alpha chain; Identified by match to protein family HMM PF00502. | Possible phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family. | 0.774 |
| cpaA-2 | sync_0517 | sync_0504 | sync_0517 | C-phycoerythrin class II alpha chain; Identified by match to protein family HMM PF00502. | Possible Phycobilisome polypeptide; Identified by match to protein family HMM PF00502. | 0.904 |
| cpaB-1 | cpaA-1 | sync_0495 | sync_0496 | C-phycoerythrin class I beta chain; Identified by match to protein family HMM PF00502. | C-phycoerythrin class I alpha chain; Identified by match to protein family HMM PF00502. | 0.994 |
| cpaB-1 | cpaA-2 | sync_0495 | sync_0504 | C-phycoerythrin class I beta chain; Identified by match to protein family HMM PF00502. | C-phycoerythrin class II alpha chain; Identified by match to protein family HMM PF00502. | 0.918 |
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