sync_0514 protein (Synechococcus sp. CC9311)

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Score

sync_0514

Identified by match to protein family HMM PF00805. (229 aa)

Predicted Functional Partners:

sync_2716

0.774

sync_0515

0.773

sync_1598

0.768

sync_0742

0.761

sync_1695

0.752

cpeC

0.580

gyrB

0.523

sync_0517

0.465

sync_0516

0.422

sync_0154

0.415

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cpeC	sync_0514	sync_0513	sync_0514	Phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; match to protein family HMM PF01383; Belongs to the phycobilisome linker protein family.	Identified by match to protein family HMM PF00805.	0.580
cpeC	sync_0515	sync_0513	sync_0515	Phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; match to protein family HMM PF01383; Belongs to the phycobilisome linker protein family.	Possible phycobilisome rod-core linker polypeptide (L-RC 28.5); Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.623
cpeC	sync_0516	sync_0513	sync_0516	Phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; match to protein family HMM PF01383; Belongs to the phycobilisome linker protein family.	Possible phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.476
cpeC	sync_0517	sync_0513	sync_0517	Phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; match to protein family HMM PF01383; Belongs to the phycobilisome linker protein family.	Possible Phycobilisome polypeptide; Identified by match to protein family HMM PF00502.	0.880
gyrB	sync_0514	sync_0092	sync_0514	DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	Identified by match to protein family HMM PF00805.	0.523
gyrB	sync_0742	sync_0092	sync_0742	DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	Conserved hypothetical protein; Identified by match to protein family HMM PF00805.	0.523
gyrB	sync_1598	sync_0092	sync_1598	DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	Pentapeptide repeat protein; Identified by match to protein family HMM PF00805.	0.523
gyrB	sync_1695	sync_0092	sync_1695	DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	Secreted pentapeptide repeats protein; Identified by match to protein family HMM PF00805.	0.523
gyrB	sync_2716	sync_0092	sync_2716	DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	Conserved hypothetical protein; Identified by match to protein family HMM PF00805.	0.523
sync_0154	sync_0514	sync_0154	sync_0514	Membrane protein, putative.	Identified by match to protein family HMM PF00805.	0.415
sync_0514	cpeC	sync_0514	sync_0513	Identified by match to protein family HMM PF00805.	Phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; match to protein family HMM PF01383; Belongs to the phycobilisome linker protein family.	0.580
sync_0514	gyrB	sync_0514	sync_0092	Identified by match to protein family HMM PF00805.	DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.523
sync_0514	sync_0154	sync_0514	sync_0154	Identified by match to protein family HMM PF00805.	Membrane protein, putative.	0.415
sync_0514	sync_0515	sync_0514	sync_0515	Identified by match to protein family HMM PF00805.	Possible phycobilisome rod-core linker polypeptide (L-RC 28.5); Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.773
sync_0514	sync_0516	sync_0514	sync_0516	Identified by match to protein family HMM PF00805.	Possible phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.422
sync_0514	sync_0517	sync_0514	sync_0517	Identified by match to protein family HMM PF00805.	Possible Phycobilisome polypeptide; Identified by match to protein family HMM PF00502.	0.465
sync_0514	sync_0742	sync_0514	sync_0742	Identified by match to protein family HMM PF00805.	Conserved hypothetical protein; Identified by match to protein family HMM PF00805.	0.761
sync_0514	sync_1598	sync_0514	sync_1598	Identified by match to protein family HMM PF00805.	Pentapeptide repeat protein; Identified by match to protein family HMM PF00805.	0.768
sync_0514	sync_1695	sync_0514	sync_1695	Identified by match to protein family HMM PF00805.	Secreted pentapeptide repeats protein; Identified by match to protein family HMM PF00805.	0.752
sync_0514	sync_2716	sync_0514	sync_2716	Identified by match to protein family HMM PF00805.	Conserved hypothetical protein; Identified by match to protein family HMM PF00805.	0.774