sync_0537 protein (Synechococcus sp. CC9311)

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second shell of interactors

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Known Interactions

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Predicted Interactions

gene neighborhood

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textmining

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[Homology]

Score

sync_0537

Identified by match to protein family HMM PF00582. (282 aa)

Predicted Functional Partners:

cpcF

0.750

apcE

0.750

sync_2918

0.722

cpcE

0.716

sync_1635

0.715

sync_1287

0.706

cpcG1

0.698

sync_2139

0.687

sync_0291

0.681

apcD

0.678

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
apcD	apcE	sync_1341	sync_2321	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	0.997
apcD	cpcE	sync_1341	sync_0486	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit; Identified by match to protein family HMM PF03130.	0.809
apcD	cpcF	sync_1341	sync_0485	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit; Identified by match to protein family HMM PF03130.	0.787
apcD	cpcG1	sync_1341	sync_2488	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Phycobilisome rod-core linker polypeptide cpcG1; Identified by similarity to SP:P29986; match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.968
apcD	sync_0291	sync_1341	sync_0291	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Conserved hypothetical protein.	0.497
apcD	sync_0537	sync_1341	sync_0537	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Identified by match to protein family HMM PF00582.	0.678
apcD	sync_1287	sync_1341	sync_1287	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Conserved hypothetical protein.	0.583
apcD	sync_1635	sync_1341	sync_1635	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	STAS domain protein; Identified by match to protein family HMM PF01740; Belongs to the anti-sigma-factor antagonist family.	0.758
apcD	sync_2139	sync_1341	sync_2139	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Conserved hypothetical protein.	0.575
apcD	sync_2918	sync_1341	sync_2918	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	Lipoprotein, putative; Identified by match to protein family HMM TIGR03042.	0.615
apcE	apcD	sync_2321	sync_1341	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	0.997
apcE	cpcE	sync_2321	sync_0486	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit; Identified by match to protein family HMM PF03130.	0.811
apcE	cpcF	sync_2321	sync_0485	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit; Identified by match to protein family HMM PF03130.	0.814
apcE	cpcG1	sync_2321	sync_2488	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Phycobilisome rod-core linker polypeptide cpcG1; Identified by similarity to SP:P29986; match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.891
apcE	sync_0291	sync_2321	sync_0291	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Conserved hypothetical protein.	0.557
apcE	sync_0537	sync_2321	sync_0537	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Identified by match to protein family HMM PF00582.	0.750
apcE	sync_1287	sync_2321	sync_1287	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Conserved hypothetical protein.	0.631
apcE	sync_1635	sync_2321	sync_1635	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	STAS domain protein; Identified by match to protein family HMM PF01740; Belongs to the anti-sigma-factor antagonist family.	0.750
apcE	sync_2139	sync_2321	sync_2139	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Conserved hypothetical protein.	0.707
apcE	sync_2918	sync_2321	sync_2918	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	Lipoprotein, putative; Identified by match to protein family HMM TIGR03042.	0.755