sync_0541 protein (Synechococcus sp. CC9311)

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sync_0541

yrdC domain, putative; Identified by match to protein family HMM PF01300; Belongs to the SUA5 family. (205 aa)

Predicted Functional Partners:

prmC

0.870

sync_0539

0.790

gcp

0.744

sync_0538

0.688

sync_2603

0.681

sync_0107

0.665

sync_0537

0.488

polA

0.465

aroE

0.450

sync_1174

0.400

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
aroE	polA	sync_2924	sync_0928	Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.466
aroE	sync_0541	sync_2924	sync_0541	Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).	yrdC domain, putative; Identified by match to protein family HMM PF01300; Belongs to the SUA5 family.	0.450
gcp	polA	sync_2156	sync_0928	O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.579
gcp	sync_0107	sync_2156	sync_0107	O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.	Conserved hypothetical protein TIGR00150; Identified by similarity to GB:CAE20312.1; match to protein family HMM PF02367; match to protein family HMM TIGR00150.	0.987
gcp	sync_0541	sync_2156	sync_0541	O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.	yrdC domain, putative; Identified by match to protein family HMM PF01300; Belongs to the SUA5 family.	0.744
gcp	sync_2603	sync_2156	sync_2603	O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.	Identified by match to protein family HMM PF00814.	0.996
polA	aroE	sync_0928	sync_2924	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).	0.466
polA	gcp	sync_0928	sync_2156	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.	0.579
polA	sync_0107	sync_0928	sync_0107	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Conserved hypothetical protein TIGR00150; Identified by similarity to GB:CAE20312.1; match to protein family HMM PF02367; match to protein family HMM TIGR00150.	0.403
polA	sync_0541	sync_0928	sync_0541	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	yrdC domain, putative; Identified by match to protein family HMM PF01300; Belongs to the SUA5 family.	0.465
polA	sync_1174	sync_0928	sync_1174	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	RecF/RecN/SMC N terminal domain protein.	0.937
prmC	sync_0537	sync_0540	sync_0537	Methyltransferase, HemK family protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.	Identified by match to protein family HMM PF00582.	0.488
prmC	sync_0538	sync_0540	sync_0538	Methyltransferase, HemK family protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.	Predicted thioesterase; Identified by match to protein family HMM PF03061.	0.689
prmC	sync_0539	sync_0540	sync_0539	Methyltransferase, HemK family protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.	Putative DNA protecting protein DprA; Identified by match to protein family HMM PF02481.	0.779
prmC	sync_0541	sync_0540	sync_0541	Methyltransferase, HemK family protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.	yrdC domain, putative; Identified by match to protein family HMM PF01300; Belongs to the SUA5 family.	0.870
sync_0107	gcp	sync_0107	sync_2156	Conserved hypothetical protein TIGR00150; Identified by similarity to GB:CAE20312.1; match to protein family HMM PF02367; match to protein family HMM TIGR00150.	O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.	0.987
sync_0107	polA	sync_0107	sync_0928	Conserved hypothetical protein TIGR00150; Identified by similarity to GB:CAE20312.1; match to protein family HMM PF02367; match to protein family HMM TIGR00150.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.403
sync_0107	sync_0541	sync_0107	sync_0541	Conserved hypothetical protein TIGR00150; Identified by similarity to GB:CAE20312.1; match to protein family HMM PF02367; match to protein family HMM TIGR00150.	yrdC domain, putative; Identified by match to protein family HMM PF01300; Belongs to the SUA5 family.	0.665
sync_0107	sync_2603	sync_0107	sync_2603	Conserved hypothetical protein TIGR00150; Identified by similarity to GB:CAE20312.1; match to protein family HMM PF02367; match to protein family HMM TIGR00150.	Identified by match to protein family HMM PF00814.	0.994
sync_0537	prmC	sync_0537	sync_0540	Identified by match to protein family HMM PF00582.	Methyltransferase, HemK family protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.	0.488