sync_0594 protein (Synechococcus sp. CC9311)

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second shell of interactors

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

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Score

sync_0594

Conserved hypothetical protein. (168 aa)

Predicted Functional Partners:

sync_0313

0.765

sync_0892

0.761

rpoZ

0.758

sync_2604

0.751

rpmF

0.724

sync_2587

0.721

sync_2268

0.716

sync_0215

0.690

sync_1523

0.678

sync_2204

0.677

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpmF	rpoZ	sync_1319	sync_2269	Ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.918
rpmF	sync_0313	sync_1319	sync_0313	Ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family.	Uncharacterized protein.	0.427
rpmF	sync_0594	sync_1319	sync_0594	Ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family.	Conserved hypothetical protein.	0.724
rpmF	sync_0892	sync_1319	sync_0892	Ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family.	Ferredoxin; Identified by match to protein family HMM PF00111.	0.408
rpmF	sync_2204	sync_1319	sync_2204	Ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family.	Uncharacterized protein.	0.741
rpmF	sync_2587	sync_1319	sync_2587	Ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family.	Conserved hypothetical protein; Identified by similarity to GB:CAE22160.1; Belongs to the UPF0367 family.	0.667
rpmF	sync_2604	sync_1319	sync_2604	Ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family.	Predicted metal-binding cluster containing protein.	0.747
rpoZ	rpmF	sync_2269	sync_1319	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family.	0.918
rpoZ	sync_0215	sync_2269	sync_0215	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	0.549
rpoZ	sync_0313	sync_2269	sync_0313	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Uncharacterized protein.	0.746
rpoZ	sync_0594	sync_2269	sync_0594	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Conserved hypothetical protein.	0.758
rpoZ	sync_0892	sync_2269	sync_0892	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Ferredoxin; Identified by match to protein family HMM PF00111.	0.755
rpoZ	sync_2204	sync_2269	sync_2204	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Uncharacterized protein.	0.682
rpoZ	sync_2268	sync_2269	sync_2268	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Conserved hypothetical protein; Identified by similarity to GB:CAE21616.1.	0.945
rpoZ	sync_2587	sync_2269	sync_2587	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Conserved hypothetical protein; Identified by similarity to GB:CAE22160.1; Belongs to the UPF0367 family.	0.772
rpoZ	sync_2604	sync_2269	sync_2604	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Predicted metal-binding cluster containing protein.	0.477
sync_0215	rpoZ	sync_0215	sync_2269	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.549
sync_0215	sync_0313	sync_0215	sync_0313	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	Uncharacterized protein.	0.755
sync_0215	sync_0594	sync_0215	sync_0594	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	Conserved hypothetical protein.	0.690
sync_0215	sync_0892	sync_0215	sync_0892	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	Ferredoxin; Identified by match to protein family HMM PF00111.	0.771