Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| guaA | lepA | sync_0047 | sync_0652 | GMP synthase, glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP. | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.530 |
| guaA | sync_0651 | sync_0047 | sync_0651 | GMP synthase, glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP. | Possible drug resistance protein; Identified by match to protein family HMM PF00893. | 0.486 |
| lepA | guaA | sync_0652 | sync_0047 | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | GMP synthase, glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP. | 0.530 |
| lepA | sync_0649 | sync_0652 | sync_0649 | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | Glycerol dehydrogenase (GLDH); Identified by match to protein family HMM PF00465. | 0.453 |
| lepA | sync_0650 | sync_0652 | sync_0650 | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | Hypothetical protein; Identified by Glimmer2; putative. | 0.548 |
| lepA | sync_0651 | sync_0652 | sync_0651 | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | Possible drug resistance protein; Identified by match to protein family HMM PF00893. | 0.548 |
| sync_0649 | lepA | sync_0649 | sync_0652 | Glycerol dehydrogenase (GLDH); Identified by match to protein family HMM PF00465. | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.453 |
| sync_0649 | sync_0650 | sync_0649 | sync_0650 | Glycerol dehydrogenase (GLDH); Identified by match to protein family HMM PF00465. | Hypothetical protein; Identified by Glimmer2; putative. | 0.625 |
| sync_0649 | sync_0651 | sync_0649 | sync_0651 | Glycerol dehydrogenase (GLDH); Identified by match to protein family HMM PF00465. | Possible drug resistance protein; Identified by match to protein family HMM PF00893. | 0.625 |
| sync_0650 | lepA | sync_0650 | sync_0652 | Hypothetical protein; Identified by Glimmer2; putative. | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.548 |
| sync_0650 | sync_0649 | sync_0650 | sync_0649 | Hypothetical protein; Identified by Glimmer2; putative. | Glycerol dehydrogenase (GLDH); Identified by match to protein family HMM PF00465. | 0.625 |
| sync_0650 | sync_0651 | sync_0650 | sync_0651 | Hypothetical protein; Identified by Glimmer2; putative. | Possible drug resistance protein; Identified by match to protein family HMM PF00893. | 0.773 |
| sync_0651 | guaA | sync_0651 | sync_0047 | Possible drug resistance protein; Identified by match to protein family HMM PF00893. | GMP synthase, glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP. | 0.486 |
| sync_0651 | lepA | sync_0651 | sync_0652 | Possible drug resistance protein; Identified by match to protein family HMM PF00893. | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.548 |
| sync_0651 | sync_0649 | sync_0651 | sync_0649 | Possible drug resistance protein; Identified by match to protein family HMM PF00893. | Glycerol dehydrogenase (GLDH); Identified by match to protein family HMM PF00465. | 0.625 |
| sync_0651 | sync_0650 | sync_0651 | sync_0650 | Possible drug resistance protein; Identified by match to protein family HMM PF00893. | Hypothetical protein; Identified by Glimmer2; putative. | 0.773 |