sync_0659 protein (Synechococcus sp. CC9311)

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query proteins and first shell of interactors

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

sync_0659

Possible pilin; Identified by match to protein family HMM TIGR02532. (168 aa)

Predicted Functional Partners:

sync_0667

0.928

sync_0666

0.911

gspO

0.724

pilC

0.687

pilT

0.650

sync_2158

0.584

sync_0660

0.547

sync_0661

0.547

pilB

0.539

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
gspO	pilB	sync_1709	sync_0021	Prepilin peptidase; Identified by similarity to SP:P31712; match to protein family HMM PF01478; match to protein family HMM PF06750.	Type IV pilus assembly protein PilB; Identified by match to protein family HMM PF00437.	0.907
gspO	pilC	sync_1709	sync_0019	Prepilin peptidase; Identified by similarity to SP:P31712; match to protein family HMM PF01478; match to protein family HMM PF06750.	Type IV pilus assembly protein PilC; Identified by match to protein family HMM PF00482.	0.904
gspO	pilT	sync_1709	sync_0020	Prepilin peptidase; Identified by similarity to SP:P31712; match to protein family HMM PF01478; match to protein family HMM PF06750.	Twitching motility protein; Identified by similarity to SP:P24559; match to protein family HMM PF00437; match to protein family HMM TIGR01420.	0.820
gspO	sync_0659	sync_1709	sync_0659	Prepilin peptidase; Identified by similarity to SP:P31712; match to protein family HMM PF01478; match to protein family HMM PF06750.	Possible pilin; Identified by match to protein family HMM TIGR02532.	0.724
gspO	sync_0667	sync_1709	sync_0667	Prepilin peptidase; Identified by similarity to SP:P31712; match to protein family HMM PF01478; match to protein family HMM PF06750.	Possible pilin; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532.	0.860
gspO	sync_2158	sync_1709	sync_2158	Prepilin peptidase; Identified by similarity to SP:P31712; match to protein family HMM PF01478; match to protein family HMM PF06750.	Twitching mobility protein PilT; Identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420.	0.813
pilB	gspO	sync_0021	sync_1709	Type IV pilus assembly protein PilB; Identified by match to protein family HMM PF00437.	Prepilin peptidase; Identified by similarity to SP:P31712; match to protein family HMM PF01478; match to protein family HMM PF06750.	0.907
pilB	pilC	sync_0021	sync_0019	Type IV pilus assembly protein PilB; Identified by match to protein family HMM PF00437.	Type IV pilus assembly protein PilC; Identified by match to protein family HMM PF00482.	0.998
pilB	pilT	sync_0021	sync_0020	Type IV pilus assembly protein PilB; Identified by match to protein family HMM PF00437.	Twitching motility protein; Identified by similarity to SP:P24559; match to protein family HMM PF00437; match to protein family HMM TIGR01420.	0.853
pilB	sync_0659	sync_0021	sync_0659	Type IV pilus assembly protein PilB; Identified by match to protein family HMM PF00437.	Possible pilin; Identified by match to protein family HMM TIGR02532.	0.539
pilB	sync_0667	sync_0021	sync_0667	Type IV pilus assembly protein PilB; Identified by match to protein family HMM PF00437.	Possible pilin; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532.	0.967
pilB	sync_2158	sync_0021	sync_2158	Type IV pilus assembly protein PilB; Identified by match to protein family HMM PF00437.	Twitching mobility protein PilT; Identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420.	0.436
pilC	gspO	sync_0019	sync_1709	Type IV pilus assembly protein PilC; Identified by match to protein family HMM PF00482.	Prepilin peptidase; Identified by similarity to SP:P31712; match to protein family HMM PF01478; match to protein family HMM PF06750.	0.904
pilC	pilB	sync_0019	sync_0021	Type IV pilus assembly protein PilC; Identified by match to protein family HMM PF00482.	Type IV pilus assembly protein PilB; Identified by match to protein family HMM PF00437.	0.998
pilC	pilT	sync_0019	sync_0020	Type IV pilus assembly protein PilC; Identified by match to protein family HMM PF00482.	Twitching motility protein; Identified by similarity to SP:P24559; match to protein family HMM PF00437; match to protein family HMM TIGR01420.	0.981
pilC	sync_0659	sync_0019	sync_0659	Type IV pilus assembly protein PilC; Identified by match to protein family HMM PF00482.	Possible pilin; Identified by match to protein family HMM TIGR02532.	0.687
pilC	sync_0667	sync_0019	sync_0667	Type IV pilus assembly protein PilC; Identified by match to protein family HMM PF00482.	Possible pilin; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532.	0.973
pilC	sync_2158	sync_0019	sync_2158	Type IV pilus assembly protein PilC; Identified by match to protein family HMM PF00482.	Twitching mobility protein PilT; Identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420.	0.915
pilT	gspO	sync_0020	sync_1709	Twitching motility protein; Identified by similarity to SP:P24559; match to protein family HMM PF00437; match to protein family HMM TIGR01420.	Prepilin peptidase; Identified by similarity to SP:P31712; match to protein family HMM PF01478; match to protein family HMM PF06750.	0.820
pilT	pilB	sync_0020	sync_0021	Twitching motility protein; Identified by similarity to SP:P24559; match to protein family HMM PF00437; match to protein family HMM TIGR01420.	Type IV pilus assembly protein PilB; Identified by match to protein family HMM PF00437.	0.853