sync_0678 protein (Synechococcus sp. CC9311)

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second shell of interactors

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Score

sync_0678

Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family. (568 aa)

Predicted Functional Partners:

sync_0315

0.772

sync_0314

0.764

sync_2215

0.739

sync_1041

0.730

sync_2139

0.719

sync_1289

0.717

sync_2717

0.716

sync_2938

0.700

sync_0732

0.697

sync_1365

0.696

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
sync_0314	sync_0315	Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Uncharacterized conserved membrane protein.	0.958
sync_0314	sync_0678	Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family.	0.764
sync_0314	sync_1041	Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.438
sync_0314	sync_1289	Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Putative membrane protein, YjgP/YjgQ family protein; Identified by match to protein family HMM PF03739.	0.775
sync_0314	sync_2215	Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Membrane protein, OMP85 family protein; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244.	0.715
sync_0314	sync_2717	Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Possible general (type II) secretion pathway protein D precursor; Identified by match to protein family HMM PF00263; match to protein family HMM PF07660; Belongs to the bacterial secretin family.	0.409
sync_0315	sync_0314	Uncharacterized conserved membrane protein.	Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	0.958
sync_0315	sync_0678	Uncharacterized conserved membrane protein.	Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family.	0.772
sync_0315	sync_1041	Uncharacterized conserved membrane protein.	Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.711
sync_0315	sync_1289	Uncharacterized conserved membrane protein.	Putative membrane protein, YjgP/YjgQ family protein; Identified by match to protein family HMM PF03739.	0.752
sync_0315	sync_2215	Uncharacterized conserved membrane protein.	Membrane protein, OMP85 family protein; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244.	0.722
sync_0315	sync_2717	Uncharacterized conserved membrane protein.	Possible general (type II) secretion pathway protein D precursor; Identified by match to protein family HMM PF00263; match to protein family HMM PF07660; Belongs to the bacterial secretin family.	0.637
sync_0678	sync_0314	Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family.	Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	0.764
sync_0678	sync_0315	Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family.	Uncharacterized conserved membrane protein.	0.772
sync_0678	sync_0732	Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family.	Conserved hypothetical protein.	0.697
sync_0678	sync_1041	Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family.	Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.730
sync_0678	sync_1289	Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family.	Putative membrane protein, YjgP/YjgQ family protein; Identified by match to protein family HMM PF03739.	0.717
sync_0678	sync_1365	Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family.	Conserved hypothetical protein; Identified by similarity to GB:CAE20894.1.	0.696
sync_0678	sync_2139	Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family.	Conserved hypothetical protein.	0.719
sync_0678	sync_2215	Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family.	Membrane protein, OMP85 family protein; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244.	0.739