STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chlGChlorophyll synthase, ChlG; Identified by match to protein family HMM PF01040; match to protein family HMM TIGR01476; match to protein family HMM TIGR02056. (308 aa)    
Predicted Functional Partners:
chlN
Light-independent protochlorophyllide reductase, N subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.
 
 
 0.986
chlP
Geranylgeranyl reductase; Identified by match to protein family HMM TIGR02023; match to protein family HMM TIGR02028.
 
 
 0.983
chlB
Light-independent protochlorophyllide reductase, B subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.
  
 
 0.982
chlL
Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.
 
 
 0.980
sync_1014
Conserved hypothetical protein; Identified by match to protein family HMM PF01370; match to protein family HMM PF05368.
 
  
 0.971
sync_1976
Light-dependent protochlorophyllide reductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide).
     
 0.902
sync_1162
Possible light-dependent protochlorophyllide oxido-reductase; Identified by match to protein family HMM PF00106.
     
  0.900
sync_2830
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106.
     
  0.900
chlM
Magnesium protoporphyrin O-methyltransferase; Identified by match to protein family HMM PF07109; match to protein family HMM TIGR02021.
 
 
 0.874
chlH
Magnesium chelatase, H subunit; Identified by match to protein family HMM PF02514; match to protein family HMM TIGR02025.
 
  
 0.855
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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