STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0733Uncharacterized secreted or membrane protein. (136 aa)    
Predicted Functional Partners:
sync_0732
Conserved hypothetical protein.
 
     0.852
ddl
D-alanine--D-alanine ligase; Cell wall formation.
       0.771
sync_1540
Bacterial regulatory proteins, Crp family protein.
  
     0.767
sync_1721
CheY-like domain containing protein.
  
     0.763
sync_0937
Conserved hypothetical protein.
  
     0.761
sync_1860
Membrane associated GTPase.
  
     0.758
sync_1168
Conserved hypothetical protein.
  
     0.743
sync_0765
DnaJ domain protein; Identified by match to protein family HMM PF00226.
  
     0.739
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.729
sync_2124
AbrB family transciptional regulator.
  
     0.721
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.