Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ispF | sync_0782 | sync_0781 | sync_0782 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). | Conserved hypothetical protein; Identified by similarity to GB:CAE20532.1; match to protein family HMM PF03992. | 0.773 |
| ispF | sync_0783 | sync_0781 | sync_0783 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). | Putative circadian phase modifier CpmA homolog. | 0.815 |
| psbX | sync_0345 | sync_2461 | sync_0345 | Photosystem II reaction centre X protein (PsbX); Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II. | Uncharacterized secreted or membrane protein. | 0.650 |
| psbX | sync_0739 | sync_2461 | sync_0739 | Photosystem II reaction centre X protein (PsbX); Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II. | Conserved hypothetical protein. | 0.684 |
| psbX | sync_0782 | sync_2461 | sync_0782 | Photosystem II reaction centre X protein (PsbX); Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II. | Conserved hypothetical protein; Identified by similarity to GB:CAE20532.1; match to protein family HMM PF03992. | 0.691 |
| psbX | sync_1142 | sync_2461 | sync_1142 | Photosystem II reaction centre X protein (PsbX); Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II. | Conserved hypothetical protein. | 0.767 |
| psbX | sync_1873 | sync_2461 | sync_1873 | Photosystem II reaction centre X protein (PsbX); Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II. | Conserved hypothetical protein. | 0.439 |
| psbX | sync_2050 | sync_2461 | sync_2050 | Photosystem II reaction centre X protein (PsbX); Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II. | Putative membrane protein. | 0.466 |
| psbX | sync_2176 | sync_2461 | sync_2176 | Photosystem II reaction centre X protein (PsbX); Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II. | Uncharacterized protein. | 0.452 |
| sync_0345 | psbX | sync_0345 | sync_2461 | Uncharacterized secreted or membrane protein. | Photosystem II reaction centre X protein (PsbX); Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II. | 0.650 |
| sync_0345 | sync_0739 | sync_0345 | sync_0739 | Uncharacterized secreted or membrane protein. | Conserved hypothetical protein. | 0.463 |
| sync_0345 | sync_0782 | sync_0345 | sync_0782 | Uncharacterized secreted or membrane protein. | Conserved hypothetical protein; Identified by similarity to GB:CAE20532.1; match to protein family HMM PF03992. | 0.746 |
| sync_0345 | sync_1142 | sync_0345 | sync_1142 | Uncharacterized secreted or membrane protein. | Conserved hypothetical protein. | 0.580 |
| sync_0345 | sync_1667 | sync_0345 | sync_1667 | Uncharacterized secreted or membrane protein. | Arylesterase. | 0.749 |
| sync_0345 | sync_2050 | sync_0345 | sync_2050 | Uncharacterized secreted or membrane protein. | Putative membrane protein. | 0.663 |
| sync_0345 | sync_2176 | sync_0345 | sync_2176 | Uncharacterized secreted or membrane protein. | Uncharacterized protein. | 0.699 |
| sync_0739 | psbX | sync_0739 | sync_2461 | Conserved hypothetical protein. | Photosystem II reaction centre X protein (PsbX); Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II. | 0.684 |
| sync_0739 | sync_0345 | sync_0739 | sync_0345 | Conserved hypothetical protein. | Uncharacterized secreted or membrane protein. | 0.463 |
| sync_0739 | sync_0782 | sync_0739 | sync_0782 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by similarity to GB:CAE20532.1; match to protein family HMM PF03992. | 0.745 |
| sync_0739 | sync_1142 | sync_0739 | sync_1142 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.669 |
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