STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0876Putative membrane protein. (216 aa)    
Predicted Functional Partners:
sync_1102
Uncharacterized conserved membrane protein; Identified by match to protein family HMM PF07681.
  
  
 0.662
sync_2911
Chloride transporter, chloride channel (ClC) family protein; Identified by match to protein family HMM PF00654.
 
  
 0.514
sync_0478
Conserved hypothetical protein.
  
     0.502
sync_2559
Conserved hypothetical protein.
  
     0.493
sync_1473
Predicted calcineurin family phosphoesterase.
  
 
   0.465
sync_1110
ParA family chromosome partitioning protein.
  
     0.437
sync_0892
Ferredoxin; Identified by match to protein family HMM PF00111.
  
     0.428
sync_2544
Putative membrane protein; Identified by similarity to GB:CAE20354.1.
  
     0.414
sync_0230
Selenide,water dikinase; Identified by match to protein family HMM PF02769.
 
    0.410
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.410
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.