STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0891Putative membrane protein; Identified by match to protein family HMM PF00892. (284 aa)    
Predicted Functional Partners:
sync_0892
Ferredoxin; Identified by match to protein family HMM PF00111.
 
     0.755
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
  
    0.565
sync_0894
Conserved hypothetical protein.
       0.565
sync_1102
Uncharacterized conserved membrane protein; Identified by match to protein family HMM PF07681.
  
   0.550
sync_1775
Steroid 5-alpha reductase, C-terminal domain, putative.
  
     0.534
sync_1816
Predicted membrane protein; Identified by match to protein family HMM PF07681.
  
   0.520
sync_0156
Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.
 
 
 0.512
sync_0890
Conserved hypothetical protein.
       0.459
sync_0154
Membrane protein, putative.
 
  
 0.456
sync_2349
Identified by match to protein family HMM PF06868.
  
     0.446
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
Server load: low (30%) [HD]