sync_0912 protein (Synechococcus sp. CC9311)

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Score

sync_0912

Helicase C-terminal domain; Identified by match to protein family HMM PF00271. (442 aa)

Predicted Functional Partners:

sync_0446

0.913

polA

0.894

rpoB

0.879

rpoA

0.876

rpoZ

0.874

sync_0038

0.643

sync_1228

0.641

sync_0451

0.626

sync_0306

0.620

sync_1178

0.608

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
polA	rpoA	sync_0928	sync_0414	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.424
polA	rpoB	sync_0928	sync_2358	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.611
polA	sync_0038	sync_0928	sync_0038	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Possible helicase; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271.	0.901
polA	sync_0446	sync_0928	sync_0446	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Conserved hypothetical protein; Identified by similarity to GB:CAE21900.1.	0.928
polA	sync_0912	sync_0928	sync_0912	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Helicase C-terminal domain; Identified by match to protein family HMM PF00271.	0.894
rpoA	polA	sync_0414	sync_0928	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.424
rpoA	rpoB	sync_0414	sync_2358	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoZ	sync_0414	sync_2269	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.997
rpoA	sync_0038	sync_0414	sync_0038	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Possible helicase; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271.	0.875
rpoA	sync_0446	sync_0414	sync_0446	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Conserved hypothetical protein; Identified by similarity to GB:CAE21900.1.	0.921
rpoA	sync_0451	sync_0414	sync_0451	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Conserved hypothetical protein.	0.672
rpoA	sync_0912	sync_0414	sync_0912	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Helicase C-terminal domain; Identified by match to protein family HMM PF00271.	0.876
rpoA	sync_1228	sync_0414	sync_1228	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized membrane protein.	0.716
rpoB	polA	sync_2358	sync_0928	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.611
rpoB	rpoA	sync_2358	sync_0414	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoZ	sync_2358	sync_2269	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.993
rpoB	sync_0038	sync_2358	sync_0038	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Possible helicase; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271.	0.873
rpoB	sync_0446	sync_2358	sync_0446	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Conserved hypothetical protein; Identified by similarity to GB:CAE21900.1.	0.915
rpoB	sync_0451	sync_2358	sync_0451	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Conserved hypothetical protein.	0.705
rpoB	sync_0912	sync_2358	sync_0912	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Helicase C-terminal domain; Identified by match to protein family HMM PF00271.	0.879