STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0935Conserved hypothetical protein. (184 aa)    
Predicted Functional Partners:
sync_0934
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
sync_0642
Conserved hypothetical protein.
  
     0.559
sync_0936
Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690.
       0.539
sync_0933
Hypothetical protein; Identified by Glimmer2; putative.
       0.520
sync_1925
Conserved hypothetical protein.
  
     0.485
sync_1926
Conserved hypothetical protein.
  
     0.483
sync_0937
Conserved hypothetical protein.
 
     0.481
sync_0591
Membrane protein, putative.
  
     0.452
sync_1378
N-acetylmuramoyl-L-alanine amidase (family 2); Identified by match to protein family HMM PF01510.
  
     0.451
sync_2673
Putative peroxidase.
  
     0.446
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.