sync_0939 protein (Synechococcus sp. CC9311)

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Known Interactions

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Predicted Interactions

gene neighborhood

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textmining

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Score

sync_0939

ABC transporter, substrate binding protein, possibly oligopeptides; Identified by match to protein family HMM PF00496. (536 aa)

Predicted Functional Partners:

dppB

0.998

dppC

0.993

sync_2703

0.984

sync_0940

0.693

sync_0387

0.613

hom

0.556

sync_0156

0.489

sync_1187

0.446

sync_0942

0.445

sync_1189

0.444

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
dppB	dppC	sync_0938	sync_0676	ABC-type oligopeptide transport system permease; Identified by match to protein family HMM PF00528.	ABC-type peptide transporter permease component; Identified by match to protein family HMM PF00528.	0.999
dppB	hom	sync_0938	sync_0941	ABC-type oligopeptide transport system permease; Identified by match to protein family HMM PF00528.	Homoserine dehydrogenase; Identified by match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447.	0.502
dppB	sync_0939	sync_0938	sync_0939	ABC-type oligopeptide transport system permease; Identified by match to protein family HMM PF00528.	ABC transporter, substrate binding protein, possibly oligopeptides; Identified by match to protein family HMM PF00496.	0.998
dppB	sync_0940	sync_0938	sync_0940	ABC-type oligopeptide transport system permease; Identified by match to protein family HMM PF00528.	Conserved hypothetical protein.	0.693
dppB	sync_0942	sync_0938	sync_0942	ABC-type oligopeptide transport system permease; Identified by match to protein family HMM PF00528.	Fe-S metabolism protein, SufE family protein; Identified by match to protein family HMM PF02657.	0.442
dppB	sync_2703	sync_0938	sync_2703	ABC-type oligopeptide transport system permease; Identified by match to protein family HMM PF00528.	ABC transporter, ATP binding component, possibly for oligopeptides; Identified by match to protein family HMM PF00005.	0.994
dppC	dppB	sync_0676	sync_0938	ABC-type peptide transporter permease component; Identified by match to protein family HMM PF00528.	ABC-type oligopeptide transport system permease; Identified by match to protein family HMM PF00528.	0.999
dppC	sync_0156	sync_0676	sync_0156	ABC-type peptide transporter permease component; Identified by match to protein family HMM PF00528.	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	0.484
dppC	sync_0939	sync_0676	sync_0939	ABC-type peptide transporter permease component; Identified by match to protein family HMM PF00528.	ABC transporter, substrate binding protein, possibly oligopeptides; Identified by match to protein family HMM PF00496.	0.993
dppC	sync_2703	sync_0676	sync_2703	ABC-type peptide transporter permease component; Identified by match to protein family HMM PF00528.	ABC transporter, ATP binding component, possibly for oligopeptides; Identified by match to protein family HMM PF00005.	0.999
hom	dppB	sync_0941	sync_0938	Homoserine dehydrogenase; Identified by match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447.	ABC-type oligopeptide transport system permease; Identified by match to protein family HMM PF00528.	0.502
hom	sync_0387	sync_0941	sync_0387	Homoserine dehydrogenase; Identified by match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447.	Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Identified by match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	0.751
hom	sync_0939	sync_0941	sync_0939	Homoserine dehydrogenase; Identified by match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447.	ABC transporter, substrate binding protein, possibly oligopeptides; Identified by match to protein family HMM PF00496.	0.556
hom	sync_0940	sync_0941	sync_0940	Homoserine dehydrogenase; Identified by match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447.	Conserved hypothetical protein.	0.511
hom	sync_0942	sync_0941	sync_0942	Homoserine dehydrogenase; Identified by match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447.	Fe-S metabolism protein, SufE family protein; Identified by match to protein family HMM PF02657.	0.684
sync_0156	dppC	sync_0156	sync_0676	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	ABC-type peptide transporter permease component; Identified by match to protein family HMM PF00528.	0.484
sync_0156	sync_0387	sync_0156	sync_0387	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Identified by match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	0.714
sync_0156	sync_0939	sync_0156	sync_0939	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	ABC transporter, substrate binding protein, possibly oligopeptides; Identified by match to protein family HMM PF00496.	0.489
sync_0387	hom	sync_0387	sync_0941	Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Identified by match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	Homoserine dehydrogenase; Identified by match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447.	0.751
sync_0387	sync_0156	sync_0387	sync_0156	Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Identified by match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	0.714