STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0972Proline-rich region. (207 aa)    
Predicted Functional Partners:
sync_1329
Conserved hypothetical protein.
  
     0.718
sync_1004
Identified by match to protein family HMM PF03364.
  
     0.708
sync_2472
Conserved hypothetical protein; Identified by similarity to PIR:AI2190.
  
     0.707
sync_1271
Cyanobacteria-specific chaperone containing dnaj domain fused to a membrane domain.
  
     0.674
sync_1979
Conserved hypothetical protein.
  
     0.661
sync_1880
Uncharacterized conserved protein; Identified by match to protein family HMM PF04357.
  
     0.648
sync_1378
N-acetylmuramoyl-L-alanine amidase (family 2); Identified by match to protein family HMM PF01510.
  
     0.635
ndhM
Conserved hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.629
sync_0196
Conserved hypothetical protein; Identified by similarity to GB:CAE22124.1.
  
     0.613
sync_1615
Conserved hypothetical protein.
  
     0.607
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.