sync_0974 protein (Synechococcus sp. CC9311)

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sync_0974

Lycopene beta cyclase; Identified by match to protein family HMM PF01266; match to protein family HMM PF05834; match to protein family HMM TIGR01790. (412 aa)

Predicted Functional Partners:

sync_2568

0.933

crtH

0.917

sync_0336

0.909

sync_1804

0.905

gyrA-2

0.773

sync_0156

0.766

sync_2884

0.680

sync_1036

0.601

sync_0972

0.580

sync_1555

0.570

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
crtH	sync_0156	sync_1140	sync_0156	Carotenoid isomerase; Identified by similarity to GB:AAM71888.1; match to protein family HMM PF01266; match to protein family HMM TIGR02730.	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	0.573
crtH	sync_0974	sync_1140	sync_0974	Carotenoid isomerase; Identified by similarity to GB:AAM71888.1; match to protein family HMM PF01266; match to protein family HMM TIGR02730.	Lycopene beta cyclase; Identified by match to protein family HMM PF01266; match to protein family HMM PF05834; match to protein family HMM TIGR01790.	0.917
crtH	sync_2568	sync_1140	sync_2568	Carotenoid isomerase; Identified by similarity to GB:AAM71888.1; match to protein family HMM PF01266; match to protein family HMM TIGR02730.	Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.	0.970
gyrA-2	sync_0156	sync_0973	sync_0156	DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	0.529
gyrA-2	sync_0972	sync_0973	sync_0972	DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	Proline-rich region.	0.516
gyrA-2	sync_0974	sync_0973	sync_0974	DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	Lycopene beta cyclase; Identified by match to protein family HMM PF01266; match to protein family HMM PF05834; match to protein family HMM TIGR01790.	0.773
sync_0156	crtH	sync_0156	sync_1140	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	Carotenoid isomerase; Identified by similarity to GB:AAM71888.1; match to protein family HMM PF01266; match to protein family HMM TIGR02730.	0.573
sync_0156	gyrA-2	sync_0156	sync_0973	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.529
sync_0156	sync_0336	sync_0156	sync_0336	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	Beta-carotene hydroxylase; Identified by match to protein family HMM PF00487.	0.553
sync_0156	sync_0974	sync_0156	sync_0974	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	Lycopene beta cyclase; Identified by match to protein family HMM PF01266; match to protein family HMM PF05834; match to protein family HMM TIGR01790.	0.766
sync_0156	sync_1804	sync_0156	sync_1804	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	Possible beta-carotene ketolase; Identified by match to protein family HMM PF00487.	0.553
sync_0336	sync_0156	sync_0336	sync_0156	Beta-carotene hydroxylase; Identified by match to protein family HMM PF00487.	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	0.553
sync_0336	sync_0974	sync_0336	sync_0974	Beta-carotene hydroxylase; Identified by match to protein family HMM PF00487.	Lycopene beta cyclase; Identified by match to protein family HMM PF01266; match to protein family HMM PF05834; match to protein family HMM TIGR01790.	0.909
sync_0336	sync_1804	sync_0336	sync_1804	Beta-carotene hydroxylase; Identified by match to protein family HMM PF00487.	Possible beta-carotene ketolase; Identified by match to protein family HMM PF00487.	0.916
sync_0336	sync_2568	sync_0336	sync_2568	Beta-carotene hydroxylase; Identified by match to protein family HMM PF00487.	Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.	0.619
sync_0972	gyrA-2	sync_0972	sync_0973	Proline-rich region.	DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.516
sync_0972	sync_0974	sync_0972	sync_0974	Proline-rich region.	Lycopene beta cyclase; Identified by match to protein family HMM PF01266; match to protein family HMM PF05834; match to protein family HMM TIGR01790.	0.580
sync_0972	sync_1036	sync_0972	sync_1036	Proline-rich region.	Uncharacterized protein.	0.421
sync_0974	crtH	sync_0974	sync_1140	Lycopene beta cyclase; Identified by match to protein family HMM PF01266; match to protein family HMM PF05834; match to protein family HMM TIGR01790.	Carotenoid isomerase; Identified by similarity to GB:AAM71888.1; match to protein family HMM PF01266; match to protein family HMM TIGR02730.	0.917
sync_0974	gyrA-2	sync_0974	sync_0973	Lycopene beta cyclase; Identified by match to protein family HMM PF01266; match to protein family HMM PF05834; match to protein family HMM TIGR01790.	DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.773