STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0983Conserved hypothetical protein; Identified by similarity to GB:AAQ00178.1. (113 aa)    
Predicted Functional Partners:
sync_0984
Conserved hypothetical protein TIGR00106; Identified by match to protein family HMM PF01910; match to protein family HMM TIGR00106.
       0.752
sync_0982
Hypothetical protein.
       0.569
sync_0985
Hypothetical protein.
       0.485
sync_0986
Hypothetical protein; Identified by Glimmer2; putative.
       0.485
sync_0987
Possible Hepatitis C virus core protein.
       0.410
sync_0988
Pseudouridine synthase RluA PA3246; Identified by match to protein family HMM PF00849.
       0.410
sync_0981
Hypothetical protein; Identified by Glimmer2; putative.
       0.407
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.