STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_1035Glutathione S-transferase domain protein; Identified by match to protein family HMM PF02798; match to protein family HMM PF06108. (325 aa)    
Predicted Functional Partners:
sync_1931
Glutathione reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.
  
 0.917
gshB
Glutathione synthase; Identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.
    
 0.908
sync_0096
Glutathione peroxidase; Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family.
   
 
 0.906
sync_1161
Glutathione S-transferase; Identified by match to protein family HMM PF02798.
     
  0.900
sync_1172
Glutathione S-transferase gst; Identified by match to protein family HMM PF02798.
     
  0.900
sync_1820
Conserved hypothetical protein.
     
  0.900
sync_2560
Glutathione S-transferase zeta class.
     
  0.900
sync_1034
Rhodanese domain protein; Identified by match to protein family HMM PF00581; Belongs to the UPF0176 family.
 
     0.787
sync_1036
Uncharacterized protein.
       0.773
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.749
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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