napA protein (Synechococcus sp. CC9311) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

napA

Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00582; match to protein family HMM PF00999. (696 aa)

Predicted Functional Partners:

sync_1046

0.691

sync_2911

0.680

sync_1043

0.623

sync_1044

0.580

sync_1042

0.568

trxB

0.561

sync_2463

0.547

sync_2162

0.543

sync_0156

0.533

sync_0392

0.521

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
napA	sync_0156	sync_1045	sync_0156	Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00582; match to protein family HMM PF00999.	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	0.533
napA	sync_0392	sync_1045	sync_0392	Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00582; match to protein family HMM PF00999.	Proline-rich region.	0.521
napA	sync_1042	sync_1045	sync_1042	Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00582; match to protein family HMM PF00999.	Hypothetical protein; Identified by Glimmer2; putative.	0.568
napA	sync_1043	sync_1045	sync_1043	Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00582; match to protein family HMM PF00999.	Hypothetical protein; Identified by Glimmer2; putative.	0.623
napA	sync_1044	sync_1045	sync_1044	Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00582; match to protein family HMM PF00999.	Putative cell envelope-related function transcriptional attenuator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.	0.580
napA	sync_1046	sync_1045	sync_1046	Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00582; match to protein family HMM PF00999.	ABC transporter, multidrug efflux family protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.	0.691
napA	sync_2162	sync_1045	sync_2162	Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00582; match to protein family HMM PF00999.	Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00999.	0.543
napA	sync_2463	sync_1045	sync_2463	Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00582; match to protein family HMM PF00999.	Lipoprotein, putative.	0.547
napA	sync_2911	sync_1045	sync_2911	Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00582; match to protein family HMM PF00999.	Chloride transporter, chloride channel (ClC) family protein; Identified by match to protein family HMM PF00654.	0.680
napA	trxB	sync_1045	sync_0910	Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00582; match to protein family HMM PF00999.	Thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292.	0.561
sync_0156	napA	sync_0156	sync_1045	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00582; match to protein family HMM PF00999.	0.533
sync_0156	sync_1046	sync_0156	sync_1046	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	ABC transporter, multidrug efflux family protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.	0.891
sync_0156	sync_2162	sync_0156	sync_2162	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00999.	0.421
sync_0156	sync_2911	sync_0156	sync_2911	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	Chloride transporter, chloride channel (ClC) family protein; Identified by match to protein family HMM PF00654.	0.811
sync_0156	trxB	sync_0156	sync_0910	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	Thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292.	0.791
sync_0392	napA	sync_0392	sync_1045	Proline-rich region.	Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00582; match to protein family HMM PF00999.	0.521
sync_0392	sync_2463	sync_0392	sync_2463	Proline-rich region.	Lipoprotein, putative.	0.710
sync_1042	napA	sync_1042	sync_1045	Hypothetical protein; Identified by Glimmer2; putative.	Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00582; match to protein family HMM PF00999.	0.568
sync_1042	sync_1043	sync_1042	sync_1043	Hypothetical protein; Identified by Glimmer2; putative.	Hypothetical protein; Identified by Glimmer2; putative.	0.773
sync_1042	sync_1044	sync_1042	sync_1044	Hypothetical protein; Identified by Glimmer2; putative.	Putative cell envelope-related function transcriptional attenuator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.	0.757

page 1 of 3

Server load: low (34%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About