recB protein (Synechococcus sp. CC9311) - STRING interaction network

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Score

recB

Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580. (1212 aa)

Predicted Functional Partners:

recC

0.994

recD

0.977

sync_1056

0.776

sync_1052

0.773

sync_0993

0.749

polA

0.703

pheT

0.622

deaD

0.606

sync_1057

0.546

sync_1050

0.523

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
deaD	recB	sync_1051	sync_1054	Superfamily II DNA/RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	0.606
deaD	recC	sync_1051	sync_1055	Superfamily II DNA/RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	Possible exodeoxyribonuclease V gamma chain; Identified by match to protein family HMM PF04257.	0.605
deaD	recD	sync_1051	sync_1053	Superfamily II DNA/RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	Exodeoxyribonuclease V, alpha subunit.	0.540
deaD	sync_1050	sync_1051	sync_1050	Superfamily II DNA/RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	Hypothetical protein.	0.773
deaD	sync_1052	sync_1051	sync_1052	Superfamily II DNA/RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	Mannose-6-phosphate isomerase; Identified by match to protein family HMM PF01050.	0.535
deaD	sync_1056	sync_1051	sync_1056	Superfamily II DNA/RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149.	0.536
pheT	polA	sync_1339	sync_0928	phenylalanyl-tRNA synthetase, beta subunit; Identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.759
pheT	recB	sync_1339	sync_1054	phenylalanyl-tRNA synthetase, beta subunit; Identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	0.622
polA	pheT	sync_0928	sync_1339	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	phenylalanyl-tRNA synthetase, beta subunit; Identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.	0.759
polA	recB	sync_0928	sync_1054	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	0.703
polA	recC	sync_0928	sync_1055	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Possible exodeoxyribonuclease V gamma chain; Identified by match to protein family HMM PF04257.	0.653
polA	recD	sync_0928	sync_1053	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Exodeoxyribonuclease V, alpha subunit.	0.551
polA	sync_0993	sync_0928	sync_0993	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Conserved hypothetical.	0.551
recB	deaD	sync_1054	sync_1051	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	Superfamily II DNA/RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	0.606
recB	pheT	sync_1054	sync_1339	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	phenylalanyl-tRNA synthetase, beta subunit; Identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.	0.622
recB	polA	sync_1054	sync_0928	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.703
recB	recC	sync_1054	sync_1055	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	Possible exodeoxyribonuclease V gamma chain; Identified by match to protein family HMM PF04257.	0.994
recB	recD	sync_1054	sync_1053	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	Exodeoxyribonuclease V, alpha subunit.	0.977
recB	sync_0993	sync_1054	sync_0993	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	Conserved hypothetical.	0.749
recB	sync_1050	sync_1054	sync_1050	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	Hypothetical protein.	0.523