recB protein (Synechococcus sp. CC9311) - STRING interaction network

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Score

recB

Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580. (1212 aa)

Predicted Functional Partners:

recC

0.991

recD

0.981

sync_0993

0.795

sync_1052

0.774

sync_1056

0.774

polA

0.676

deaD

0.561

sync_1057

0.546

sync_1050

0.523

recA

0.487

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
deaD	recB	sync_1051	sync_1054	Superfamily II DNA/RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	0.561
deaD	recC	sync_1051	sync_1055	Superfamily II DNA/RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	Possible exodeoxyribonuclease V gamma chain; Identified by match to protein family HMM PF04257.	0.557
deaD	recD	sync_1051	sync_1053	Superfamily II DNA/RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	Exodeoxyribonuclease V, alpha subunit.	0.557
deaD	sync_1050	sync_1051	sync_1050	Superfamily II DNA/RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	Hypothetical protein.	0.773
deaD	sync_1052	sync_1051	sync_1052	Superfamily II DNA/RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	Mannose-6-phosphate isomerase; Identified by match to protein family HMM PF01050.	0.533
deaD	sync_1056	sync_1051	sync_1056	Superfamily II DNA/RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149.	0.544
polA	recA	sync_0928	sync_0443	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.992
polA	recB	sync_0928	sync_1054	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	0.676
polA	recC	sync_0928	sync_1055	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Possible exodeoxyribonuclease V gamma chain; Identified by match to protein family HMM PF04257.	0.581
polA	recD	sync_0928	sync_1053	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Exodeoxyribonuclease V, alpha subunit.	0.485
polA	sync_0993	sync_0928	sync_0993	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Conserved hypothetical.	0.485
recA	polA	sync_0443	sync_0928	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.992
recA	recB	sync_0443	sync_1054	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	0.487
recB	deaD	sync_1054	sync_1051	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	Superfamily II DNA/RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	0.561
recB	polA	sync_1054	sync_0928	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.676
recB	recA	sync_1054	sync_0443	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.487
recB	recC	sync_1054	sync_1055	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	Possible exodeoxyribonuclease V gamma chain; Identified by match to protein family HMM PF04257.	0.991
recB	recD	sync_1054	sync_1053	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	Exodeoxyribonuclease V, alpha subunit.	0.981
recB	sync_0993	sync_1054	sync_0993	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	Conserved hypothetical.	0.795
recB	sync_1050	sync_1054	sync_1050	Exodeoxyribonuclease V, beta subunit; Identified by match to protein family HMM PF00580.	Hypothetical protein.	0.523