sync_1110 protein (Synechococcus sp. CC9311)

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Score

sync_1110

ParA family chromosome partitioning protein. (230 aa)

Predicted Functional Partners:

rpmH

0.772

sync_2232

0.688

sync_1111

0.678

sync_0892

0.659

sync_0478

0.619

sync_0155

0.618

dnaA

0.596

ribAB

0.591

topA

0.583

sync_0215

0.578

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
dnaA	rpmH	sync_1933	sync_2098	Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	0.463
dnaA	sync_1110	sync_1933	sync_1110	Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.	ParA family chromosome partitioning protein.	0.596
dnaA	topA	sync_1933	sync_2114	Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.633
ribAB	sync_1110	sync_1383	sync_1110	Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.	ParA family chromosome partitioning protein.	0.591
ribAB	topA	sync_1383	sync_2114	Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.532
rpmH	dnaA	sync_2098	sync_1933	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.	0.463
rpmH	sync_0215	sync_2098	sync_0215	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	0.476
rpmH	sync_0892	sync_2098	sync_0892	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	Ferredoxin; Identified by match to protein family HMM PF00111.	0.623
rpmH	sync_1110	sync_2098	sync_1110	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	ParA family chromosome partitioning protein.	0.772
rpmH	sync_2232	sync_2098	sync_2232	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	Conserved hypothetical protein; Identified by similarity to GB:CAE07060.1.	0.580
sync_0155	sync_1110	sync_0155	sync_1110	Conserved hypothetical protein.	ParA family chromosome partitioning protein.	0.618
sync_0215	rpmH	sync_0215	sync_2098	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	0.476
sync_0215	sync_0892	sync_0215	sync_0892	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	Ferredoxin; Identified by match to protein family HMM PF00111.	0.771
sync_0215	sync_1110	sync_0215	sync_1110	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	ParA family chromosome partitioning protein.	0.578
sync_0478	sync_1110	sync_0478	sync_1110	Conserved hypothetical protein.	ParA family chromosome partitioning protein.	0.619
sync_0478	sync_2232	sync_0478	sync_2232	Conserved hypothetical protein.	Conserved hypothetical protein; Identified by similarity to GB:CAE07060.1.	0.734
sync_0892	rpmH	sync_0892	sync_2098	Ferredoxin; Identified by match to protein family HMM PF00111.	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	0.623
sync_0892	sync_0215	sync_0892	sync_0215	Ferredoxin; Identified by match to protein family HMM PF00111.	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	0.771
sync_0892	sync_1110	sync_0892	sync_1110	Ferredoxin; Identified by match to protein family HMM PF00111.	ParA family chromosome partitioning protein.	0.659
sync_1110	dnaA	sync_1110	sync_1933	ParA family chromosome partitioning protein.	Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.	0.596