STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbpTransferase hexapaptide repeat protein. (187 aa)    
Predicted Functional Partners:
sync_0948
Carbonic anhydrase; Identified by match to protein family HMM PF00484; match to protein family HMM TIGR01409.
  
 
 
 0.815
cbbL
Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.
    
 
 0.762
cbbS
Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.
    
 
 0.741
psbY
Photosystem II protein Y-related protein; Manganese-binding polypeptide with L-arginine metabolizing enzyme activity. Component of the core of photosystem II. Belongs to the PsbY family.
       0.739
sync_1139
Putative cation efflux transporter (CDF family); Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297.
 
     0.653
gid
Gid protein; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.
       0.599
crtH
Carotenoid isomerase; Identified by similarity to GB:AAM71888.1; match to protein family HMM PF01266; match to protein family HMM TIGR02730.
       0.533
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.
     
  0.499
sync_1134
Response regulator receiver domain; Identified by match to protein family HMM PF00072.
       0.475
sync_1141
Hypothetical protein; Identified by Glimmer2; putative.
       0.414
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.