sync_1214 protein (Synechococcus sp. CC9311)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

sync_1214

ABC transporter RzcB, putative. (569 aa)

Predicted Functional Partners:

sync_1216

0.963

sync_1217

0.861

sync_1215

0.852

hlyD

0.809

sync_0709

0.741

sync_1129

0.731

sync_1260

0.712

sync_1046

0.549

sync_1208

0.549

sync_1638

0.549

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
hlyD	sync_0709	sync_2862	sync_0709	Possible transporter component; Identified by match to protein family HMM PF00529.	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	0.651
hlyD	sync_1129	sync_2862	sync_1129	Possible transporter component; Identified by match to protein family HMM PF00529.	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	0.626
hlyD	sync_1214	sync_2862	sync_1214	Possible transporter component; Identified by match to protein family HMM PF00529.	ABC transporter RzcB, putative.	0.809
hlyD	sync_1215	sync_2862	sync_1215	Possible transporter component; Identified by match to protein family HMM PF00529.	ABC transporter, ATP-binding protein domain protein; Identified by match to protein family HMM PF00005.	0.657
hlyD	sync_1217	sync_2862	sync_1217	Possible transporter component; Identified by match to protein family HMM PF00529.	Structural toxin protein RtxA; Identified by match to protein family HMM PF00353.	0.649
hlyD	sync_1260	sync_2862	sync_1260	Possible transporter component; Identified by match to protein family HMM PF00529.	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	0.659
sync_0709	hlyD	sync_0709	sync_2862	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	Possible transporter component; Identified by match to protein family HMM PF00529.	0.651
sync_0709	sync_1214	sync_0709	sync_1214	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	ABC transporter RzcB, putative.	0.741
sync_0709	sync_1215	sync_0709	sync_1215	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	ABC transporter, ATP-binding protein domain protein; Identified by match to protein family HMM PF00005.	0.544
sync_0709	sync_1216	sync_0709	sync_1216	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	Identified by match to protein family HMM PF00529.	0.759
sync_0709	sync_1217	sync_0709	sync_1217	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	Structural toxin protein RtxA; Identified by match to protein family HMM PF00353.	0.774
sync_1046	sync_1214	sync_1046	sync_1214	ABC transporter, multidrug efflux family protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.	ABC transporter RzcB, putative.	0.549
sync_1046	sync_1215	sync_1046	sync_1215	ABC transporter, multidrug efflux family protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.	ABC transporter, ATP-binding protein domain protein; Identified by match to protein family HMM PF00005.	0.606
sync_1129	hlyD	sync_1129	sync_2862	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	Possible transporter component; Identified by match to protein family HMM PF00529.	0.626
sync_1129	sync_1214	sync_1129	sync_1214	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	ABC transporter RzcB, putative.	0.731
sync_1129	sync_1215	sync_1129	sync_1215	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	ABC transporter, ATP-binding protein domain protein; Identified by match to protein family HMM PF00005.	0.526
sync_1129	sync_1216	sync_1129	sync_1216	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	Identified by match to protein family HMM PF00529.	0.756
sync_1208	sync_1214	sync_1208	sync_1214	ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.	ABC transporter RzcB, putative.	0.549
sync_1208	sync_1215	sync_1208	sync_1215	ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.	ABC transporter, ATP-binding protein domain protein; Identified by match to protein family HMM PF00005.	0.663
sync_1214	hlyD	sync_1214	sync_2862	ABC transporter RzcB, putative.	Possible transporter component; Identified by match to protein family HMM PF00529.	0.809