sync_1216 protein (Synechococcus sp. CC9311)

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

sync_1216

Identified by match to protein family HMM PF00529. (511 aa)

Predicted Functional Partners:

sync_1214

0.963

sync_1215

0.956

sync_1217

0.863

sync_0709

0.759

sync_1260

0.757

sync_1129

0.756

hlyB

0.641

sync_1041

0.521

sync_2541

0.521

sync_0573

0.520

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
hlyB	sync_0573	sync_2861	sync_0573	ABC transporter, multi drug efflux family protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR01846.	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.772
hlyB	sync_0709	sync_2861	sync_0709	ABC transporter, multi drug efflux family protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR01846.	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	0.536
hlyB	sync_1041	sync_2861	sync_1041	ABC transporter, multi drug efflux family protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR01846.	Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.492
hlyB	sync_1129	sync_2861	sync_1129	ABC transporter, multi drug efflux family protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR01846.	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	0.524
hlyB	sync_1216	sync_2861	sync_1216	ABC transporter, multi drug efflux family protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR01846.	Identified by match to protein family HMM PF00529.	0.641
hlyB	sync_1217	sync_2861	sync_1217	ABC transporter, multi drug efflux family protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR01846.	Structural toxin protein RtxA; Identified by match to protein family HMM PF00353.	0.624
hlyB	sync_1260	sync_2861	sync_1260	ABC transporter, multi drug efflux family protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR01846.	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	0.509
hlyB	sync_2541	sync_2861	sync_2541	ABC transporter, multi drug efflux family protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR01846.	Possible RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.503
sync_0573	hlyB	sync_0573	sync_2861	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	ABC transporter, multi drug efflux family protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR01846.	0.772
sync_0573	sync_1041	sync_0573	sync_1041	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.403
sync_0573	sync_1214	sync_0573	sync_1214	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	ABC transporter RzcB, putative.	0.416
sync_0573	sync_1215	sync_0573	sync_1215	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	ABC transporter, ATP-binding protein domain protein; Identified by match to protein family HMM PF00005.	0.416
sync_0573	sync_1216	sync_0573	sync_1216	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Identified by match to protein family HMM PF00529.	0.520
sync_0573	sync_1217	sync_0573	sync_1217	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Structural toxin protein RtxA; Identified by match to protein family HMM PF00353.	0.464
sync_0573	sync_2541	sync_0573	sync_2541	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Possible RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.403
sync_0709	hlyB	sync_0709	sync_2861	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	ABC transporter, multi drug efflux family protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR01846.	0.536
sync_0709	sync_1214	sync_0709	sync_1214	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	ABC transporter RzcB, putative.	0.741
sync_0709	sync_1215	sync_0709	sync_1215	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	ABC transporter, ATP-binding protein domain protein; Identified by match to protein family HMM PF00005.	0.544
sync_0709	sync_1216	sync_0709	sync_1216	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	Identified by match to protein family HMM PF00529.	0.759
sync_0709	sync_1217	sync_0709	sync_1217	Type I secretion target GGXGXDXXX repeat protein; Identified by match to protein family HMM PF00353.	Structural toxin protein RtxA; Identified by match to protein family HMM PF00353.	0.774