STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_1222Conserved hypothetical protein. (224 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
 
 0.874
sync_1224
Putative 2-octaprenyl-6-methoxyphenol hydroxylase; Identified by match to protein family HMM PF01494.
 
    0.791
sync_2610
Uncharacterized protein.
  
     0.774
sync_2462
Conserved hypothetical protein; Identified by similarity to GB:CAE21766.1; match to protein family HMM PF07444.
  
     0.770
sync_2572
Conserved hypothetical protein.
  
     0.770
sync_0769
Uncharacterized conserved membrane protein; Belongs to the BI1 family.
  
   
 0.769
sync_1225
Conserved hypothetical protein.
 
     0.766
sync_1721
CheY-like domain containing protein.
  
     0.738
sync_2198
Uncharacterized protein.
  
     0.726
sync_1305
Uncharacterized protein.
  
     0.724
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.