STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_1273ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (213 aa)    
Predicted Functional Partners:
sync_0597
Possible cobalt transport protein; Identified by match to protein family HMM PF02361.
 
 0.985
sync_1560
Identified by match to protein family HMM PF02632.
   
 0.949
sync_2588
Possible ABC transporter, ATP-binding component; Identified by match to protein family HMM PF00005.
 
  
 
0.902
hslO
33 kDa chaperonin (Heat shock protein 33 homolog) (HSP33); Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.
       0.801
sync_1274
Uncharacterized protein.
 
     0.729
sync_2130
Drug exporter-1 ABC transporter (DrugE1) family, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01188.
 
    0.710
sync_1498
Manganese/zinc/iron chelate ABC ransporter (MZT) family, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
   
 0.648
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
     0.644
cbiG/cobJ
cbiG protein/precorrin-3B C17-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM PF01890; match to protein family HMM TIGR01466.
  
  
 0.629
cysS
cysteinyl-tRNA synthetase; Identified by match to protein family HMM PF01406; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
   
 0.587
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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