STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_1297Hypothetical protein; Identified by Glimmer2; putative. (169 aa)    
Predicted Functional Partners:
sync_1295
Membrane protein, TerC family protein; Identified by match to protein family HMM PF03741.
       0.773
sync_1296
Conserved hypothetical protein; Identified by similarity to GB:BAC09630.1.
       0.773
sync_1298
Hypothetical protein; Identified by Glimmer2; putative.
       0.768
sync_1299
Hypothetical protein.
       0.768
sync_1300
DNA and RNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; Belongs to the DEAD box helicase family.
       0.660
sync_1952
Conserved hypothetical protein.
  
     0.599
sync_1294
Conserved hypothetical protein; Identified by similarity to GB:CAE20948.1.
       0.560
sync_2207
Cyanobacteria-specific protein containing UvrC-like endonuclease domain.
  
     0.523
sync_1496
Thioredoxin-like protein.
  
     0.501
sync_1102
Uncharacterized conserved membrane protein; Identified by match to protein family HMM PF07681.
  
     0.456
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.