Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sync_1332Conserved hypothetical protein. (431 aa)    
Predicted Functional Partners:
sync_1335
Conserved hypothetical protein.
 
  
 0.800
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.781
sync_2139
Conserved hypothetical protein.
  
   
 0.777
sync_0306
Repeats containing protein.
 
     0.773
sync_2052
Conserved hypothetical protein.
  
  
 0.773
sync_1900
Conserved hypothetical protein.
  
     0.763
sync_0739
Conserved hypothetical protein.
  
     0.762
sync_2628
Conserved hypothetical protein.
  
     0.762
sync_2916
Identified by match to protein family HMM PF04932.
  
     0.762
sync_2918
Lipoprotein, putative; Identified by match to protein family HMM TIGR03042.
  
     0.761
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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