STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_1343Conserved hypothetical protein; Identified by similarity to GB:CAE20910.1. (562 aa)    
Predicted Functional Partners:
sync_1635
STAS domain protein; Identified by match to protein family HMM PF01740; Belongs to the anti-sigma-factor antagonist family.
  
    0.942
sync_2052
Conserved hypothetical protein.
  
   
 0.780
sync_2139
Conserved hypothetical protein.
 
   
 0.775
sync_2628
Conserved hypothetical protein.
  
     0.773
sync_1615
Conserved hypothetical protein.
  
     0.772
sync_1024
Conserved hypothetical protein.
  
     0.769
sync_2942
Uncharacterized membrane protein.
  
     0.764
sync_0306
Repeats containing protein.
  
     0.760
sync_1880
Uncharacterized conserved protein; Identified by match to protein family HMM PF04357.
  
     0.756
sync_2206
Conserved hypothetical protein.
  
     0.755
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.