Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sync_1343Conserved hypothetical protein; Identified by similarity to GB:CAE20910.1. (562 aa)    
Predicted Functional Partners:
sync_1635
STAS domain protein; Identified by match to protein family HMM PF01740; Belongs to the anti-sigma-factor antagonist family.
  
    0.889
sync_0076
Curli production assembly/transport component CsgG subfamily protein; Identified by match to protein family HMM PF03783.
  
 
 
 0.824
sync_2628
Conserved hypothetical protein.
  
     0.773
sync_1615
Conserved hypothetical protein.
  
     0.772
sync_2052
Conserved hypothetical protein.
  
   
 0.772
sync_2139
Conserved hypothetical protein.
 
     0.771
sync_1024
Conserved hypothetical protein.
  
     0.769
sync_2942
Uncharacterized membrane protein.
  
     0.764
sync_0306
Repeats containing protein.
  
     0.760
sync_1880
Uncharacterized conserved protein; Identified by match to protein family HMM PF04357.
  
     0.756
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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