STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_1352Uncharacterized protein. (106 aa)    
Predicted Functional Partners:
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
       0.787
sync_0217
Conserved hypothetical protein.
  
     0.711
sync_0297
Conserved hypothetical protein.
  
     0.688
sync_2171
Short-chain dehydrogenase/reductase family enzyme; Identified by match to protein family HMM PF00106.
  
     0.637
sync_1667
Arylesterase.
  
     0.634
sync_2350
Conserved hypothetical protein.
  
     0.629
sync_0298
Uncharacterized membrane protein.
  
     0.621
sync_2713
Uncharacterized secreted protein.
  
     0.614
sync_2053
Uncharacterized protein.
  
     0.613
sync_2198
Uncharacterized protein.
  
     0.604
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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