STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_1372Phage integrase, putative; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family. (402 aa)    
Predicted Functional Partners:
sync_0525
Conserved hypothetical protein; Identified by similarity to GB:CAE21848.1; match to protein family HMM TIGR00201.
   
    0.623
sync_2059
Hypothetical protein; Identified by Glimmer2; putative; Belongs to the OprB family.
  
     0.621
sync_0306
Repeats containing protein.
  
     0.616
sync_0156
Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.
  
 
 0.610
sync_1043
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.585
sync_2139
Conserved hypothetical protein.
  
     0.580
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.579
sync_1615
Conserved hypothetical protein.
  
     0.561
sync_2052
Conserved hypothetical protein.
  
     0.550
sync_1343
Conserved hypothetical protein; Identified by similarity to GB:CAE20910.1.
  
     0.548
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
Server load: low (40%) [HD]