STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_1468Conserved hypothetical protein; Identified by similarity to GB:CAE07970.1. (158 aa)    
Predicted Functional Partners:
sync_2860
Conserved hypothetical protein.
  
     0.655
sync_2602
Uncharacterized conserved protein; Identified by match to protein family HMM PF02698.
  
     0.619
sync_2409
ParB nuclease domain protein; Identified by match to protein family HMM PF02195.
  
     0.607
sync_1331
Conserved hypothetical protein; Identified by similarity to GB:CAE20920.1.
  
     0.592
sync_2041
Uncharacterized membrane protein.
  
     0.586
sync_2634
Conserved hypothetical protein.
  
     0.568
petE
Plastocyanin; Identified by match to protein family HMM PF00127; match to protein family HMM TIGR02656.
  
     0.563
sync_1523
Uncharacterized protein.
  
     0.561
sync_1844
Carotenoid isomerase, putative; Identified by match to protein family HMM PF01593.
  
     0.555
sync_2484
Ferredoxin thioredoxin reductase, catalytic beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
  
     0.548
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.