sync_1472 protein (Synechococcus sp. CC9311)

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Score

sync_1472

Possible transcriptional regulator protein; Identified by match to protein family HMM PF00037. (732 aa)

Predicted Functional Partners:

sync_0063

0.709

sync_2106

0.709

rpoA

0.599

rpoZ

0.599

rpoB

0.599

sync_2602

0.595

fcs

0.572

sync_2634

0.566

sync_2779

0.561

sync_2552

0.554

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
fcs	sync_1472	sync_1471	sync_1472	feruloyl-CoA synthetase; Identified by similarity to GB:CAC18323.1; match to protein family HMM PF00501; match to protein family HMM TIGR01923.	Possible transcriptional regulator protein; Identified by match to protein family HMM PF00037.	0.572
rpoA	rpoB	sync_0414	sync_2358	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoZ	sync_0414	sync_2269	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.997
rpoA	sync_1472	sync_0414	sync_1472	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Possible transcriptional regulator protein; Identified by match to protein family HMM PF00037.	0.599
rpoB	rpoA	sync_2358	sync_0414	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoZ	sync_2358	sync_2269	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.993
rpoB	sync_1472	sync_2358	sync_1472	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Possible transcriptional regulator protein; Identified by match to protein family HMM PF00037.	0.599
rpoZ	rpoA	sync_2269	sync_0414	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
rpoZ	rpoB	sync_2269	sync_2358	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.993
rpoZ	sync_1472	sync_2269	sync_1472	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Possible transcriptional regulator protein; Identified by match to protein family HMM PF00037.	0.599
rpoZ	sync_2552	sync_2269	sync_2552	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Conserved hypothetical protein; Identified by similarity to GB:CAE08712.1.	0.447
sync_0063	sync_1472	sync_0063	sync_1472	Conserved hypothetical protein.	Possible transcriptional regulator protein; Identified by match to protein family HMM PF00037.	0.709
sync_1472	fcs	sync_1472	sync_1471	Possible transcriptional regulator protein; Identified by match to protein family HMM PF00037.	feruloyl-CoA synthetase; Identified by similarity to GB:CAC18323.1; match to protein family HMM PF00501; match to protein family HMM TIGR01923.	0.572
sync_1472	rpoA	sync_1472	sync_0414	Possible transcriptional regulator protein; Identified by match to protein family HMM PF00037.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.599
sync_1472	rpoB	sync_1472	sync_2358	Possible transcriptional regulator protein; Identified by match to protein family HMM PF00037.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.599
sync_1472	rpoZ	sync_1472	sync_2269	Possible transcriptional regulator protein; Identified by match to protein family HMM PF00037.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.599
sync_1472	sync_0063	sync_1472	sync_0063	Possible transcriptional regulator protein; Identified by match to protein family HMM PF00037.	Conserved hypothetical protein.	0.709
sync_1472	sync_2106	sync_1472	sync_2106	Possible transcriptional regulator protein; Identified by match to protein family HMM PF00037.	Identified by match to protein family HMM PF04012.	0.709
sync_1472	sync_2552	sync_1472	sync_2552	Possible transcriptional regulator protein; Identified by match to protein family HMM PF00037.	Conserved hypothetical protein; Identified by similarity to GB:CAE08712.1.	0.554
sync_1472	sync_2602	sync_1472	sync_2602	Possible transcriptional regulator protein; Identified by match to protein family HMM PF00037.	Uncharacterized conserved protein; Identified by match to protein family HMM PF02698.	0.595