STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_1473Predicted calcineurin family phosphoesterase. (124 aa)    
Predicted Functional Partners:
sync_1231
EF hand domain protein.
    
 0.979
sync_0756
FKBP-type peptidyl-prolyl cis-trans isomerase; Identified by match to protein family HMM PF00254.
   
 0.937
sync_1952
Conserved hypothetical protein.
  
 
  0.895
sync_1228
Uncharacterized membrane protein.
   
 0.879
sync_1563
Identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231.
   
 0.851
sync_1437
Predicted exonuclease involved in mRNA processing.
   
 
 0.746
sync_2860
Conserved hypothetical protein.
 
 
 0.740
sync_2272
Hypothetical protein.
    
 0.729
sync_2585
Putative membrane protein.
  
     0.723
sync_1426
Conserved hypothetical protein; Identified by similarity to GB:CAE20846.1.
  
     0.674
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.