STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sync_1482Mechanosensitive ion channel family protein; Identified by match to protein family HMM PF00924. (747 aa)    
Predicted Functional Partners:
sync_2059
Hypothetical protein; Identified by Glimmer2; putative; Belongs to the OprB family.
  
     0.620
sync_1932
Conserved hypothetical protein.
  
     0.606
sync_2139
Conserved hypothetical protein.
  
     0.570
sync_0306
Repeats containing protein.
  
    0.565
sync_1481
Hypothetical protein; Identified by Glimmer2; putative.
       0.546
sync_1880
Uncharacterized conserved protein; Identified by match to protein family HMM PF04357.
  
     0.517
sync_1043
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.501
sync_2938
Esterase/lipase/thioesterase family active site.
  
     0.500
sync_1332
Conserved hypothetical protein.
  
     0.480
sync_1433
Possible endolysin.
  
     0.478
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
Server load: low (30%) [HD]