Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| sync_0314 | sync_0315 | Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Uncharacterized conserved membrane protein. | 0.958 |
| sync_0314 | sync_1041 | Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321. | 0.438 |
| sync_0314 | sync_1289 | Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Putative membrane protein, YjgP/YjgQ family protein; Identified by match to protein family HMM PF03739. | 0.775 |
| sync_0314 | sync_1500 | Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family. | 0.763 |
| sync_0314 | sync_2215 | Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Membrane protein, OMP85 family protein; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244. | 0.715 |
| sync_0314 | sync_2717 | Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Possible general (type II) secretion pathway protein D precursor; Identified by match to protein family HMM PF00263; match to protein family HMM PF07660; Belongs to the bacterial secretin family. | 0.409 |
| sync_0315 | sync_0314 | Uncharacterized conserved membrane protein. | Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.958 |
| sync_0315 | sync_1041 | Uncharacterized conserved membrane protein. | Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321. | 0.711 |
| sync_0315 | sync_1289 | Uncharacterized conserved membrane protein. | Putative membrane protein, YjgP/YjgQ family protein; Identified by match to protein family HMM PF03739. | 0.752 |
| sync_0315 | sync_1500 | Uncharacterized conserved membrane protein. | Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family. | 0.772 |
| sync_0315 | sync_2215 | Uncharacterized conserved membrane protein. | Membrane protein, OMP85 family protein; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244. | 0.722 |
| sync_0315 | sync_2717 | Uncharacterized conserved membrane protein. | Possible general (type II) secretion pathway protein D precursor; Identified by match to protein family HMM PF00263; match to protein family HMM PF07660; Belongs to the bacterial secretin family. | 0.637 |
| sync_0732 | sync_1041 | Conserved hypothetical protein. | Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321. | 0.543 |
| sync_0732 | sync_1365 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by similarity to GB:CAE20894.1. | 0.729 |
| sync_0732 | sync_1500 | Conserved hypothetical protein. | Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family. | 0.720 |
| sync_0732 | sync_2139 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.752 |
| sync_0732 | sync_2215 | Conserved hypothetical protein. | Membrane protein, OMP85 family protein; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244. | 0.436 |
| sync_0732 | sync_2938 | Conserved hypothetical protein. | Esterase/lipase/thioesterase family active site. | 0.675 |
| sync_1041 | sync_0314 | Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321. | Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.438 |
| sync_1041 | sync_0315 | Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321. | Uncharacterized conserved membrane protein. | 0.711 |
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