Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| sync_0306 | sync_1041 | Repeats containing protein. | Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321. | 0.718 |
| sync_0306 | sync_1509 | Repeats containing protein. | Conserved hypothetical protein. | 0.561 |
| sync_0306 | sync_2015 | Repeats containing protein. | Uncharacterized membrane protein. | 0.701 |
| sync_0306 | sync_2206 | Repeats containing protein. | Conserved hypothetical protein. | 0.411 |
| sync_0306 | sync_2274 | Repeats containing protein. | Ferredoxin-thioredoxin reductase variable chain. | 0.478 |
| sync_0306 | sync_2463 | Repeats containing protein. | Lipoprotein, putative. | 0.643 |
| sync_0306 | sync_2464 | Repeats containing protein. | Lipoprotein, putative. | 0.564 |
| sync_0306 | sync_2541 | Repeats containing protein. | Possible RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321. | 0.459 |
| sync_0306 | sync_2811 | Repeats containing protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.738 |
| sync_1041 | sync_0306 | Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321. | Repeats containing protein. | 0.718 |
| sync_1041 | sync_1509 | Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321. | Conserved hypothetical protein. | 0.747 |
| sync_1041 | sync_2015 | Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321. | Uncharacterized membrane protein. | 0.560 |
| sync_1509 | sync_0306 | Conserved hypothetical protein. | Repeats containing protein. | 0.561 |
| sync_1509 | sync_1041 | Conserved hypothetical protein. | Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321. | 0.747 |
| sync_1509 | sync_1510 | Conserved hypothetical protein. | Cation efflux system protein czcA-1; Identified by match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.914 |
| sync_1509 | sync_2015 | Conserved hypothetical protein. | Uncharacterized membrane protein. | 0.661 |
| sync_1509 | sync_2206 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.625 |
| sync_1509 | sync_2274 | Conserved hypothetical protein. | Ferredoxin-thioredoxin reductase variable chain. | 0.564 |
| sync_1509 | sync_2463 | Conserved hypothetical protein. | Lipoprotein, putative. | 0.749 |
| sync_1509 | sync_2464 | Conserved hypothetical protein. | Lipoprotein, putative. | 0.738 |
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