sync_1514 protein (Synechococcus sp. CC9311)

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second shell of interactors

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Predicted Interactions

gene neighborhood

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textmining

co-expression

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Score

sync_1514

GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254. (488 aa)

Predicted Functional Partners:

sync_2671

0.931

sync_1512

0.849

sync_1513

0.773

sync_2820

0.734

fadD-2

0.682

sync_0573

0.653

sync_1079

0.584

sync_1516

0.517

pmgA

0.459

sync_2745

0.419

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
fadD-2	sync_1079	sync_1515	sync_1079	long-chain-fatty-acid-CoA ligase.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.416
fadD-2	sync_1513	sync_1515	sync_1513	long-chain-fatty-acid-CoA ligase.	Lipoprotein, putative.	0.698
fadD-2	sync_1514	sync_1515	sync_1514	long-chain-fatty-acid-CoA ligase.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.682
fadD-2	sync_1516	sync_1515	sync_1516	long-chain-fatty-acid-CoA ligase.	Hydrolase CocE/NonD family protein subfamily; Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976.	0.504
pmgA	sync_0573	sync_1580	sync_0573	pmgA protein; Identified by similarity to GB:BAA20429.1.	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.645
pmgA	sync_1079	sync_1580	sync_1079	pmgA protein; Identified by similarity to GB:BAA20429.1.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.524
pmgA	sync_1512	sync_1580	sync_1512	pmgA protein; Identified by similarity to GB:BAA20429.1.	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.553
pmgA	sync_1514	sync_1580	sync_1514	pmgA protein; Identified by similarity to GB:BAA20429.1.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.459
pmgA	sync_2671	sync_1580	sync_2671	pmgA protein; Identified by similarity to GB:BAA20429.1.	Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.878
sync_0573	pmgA	sync_0573	sync_1580	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	pmgA protein; Identified by similarity to GB:BAA20429.1.	0.645
sync_0573	sync_1079	sync_0573	sync_1079	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.999
sync_0573	sync_1512	sync_0573	sync_1512	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.968
sync_0573	sync_1514	sync_0573	sync_1514	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.653
sync_0573	sync_2671	sync_0573	sync_2671	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.989
sync_0573	sync_2745	sync_0573	sync_2745	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Adenylate cyclase, putative; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226.	0.793
sync_0573	sync_2820	sync_0573	sync_2820	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.967
sync_1079	fadD-2	sync_1079	sync_1515	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	long-chain-fatty-acid-CoA ligase.	0.416
sync_1079	pmgA	sync_1079	sync_1580	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	pmgA protein; Identified by similarity to GB:BAA20429.1.	0.524
sync_1079	sync_0573	sync_1079	sync_0573	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.999
sync_1079	sync_1512	sync_1079	sync_1512	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.923