apcB-1 protein (Synechococcus sp. CC9311) - STRING interaction network

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Score

apcB-1

Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502. (174 aa)

Predicted Functional Partners:

apcE

0.999

apcC

0.999

apcD

0.997

apcA

0.995

apcB-2

0.995

cpcG1

0.993

cpcA

0.971

cpcB

0.957

psbV

0.886

cpcS-4

0.878

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
apcA	apcB-1	sync_2323	sync_1567	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502.	0.995
apcA	apcB-2	sync_2323	sync_2324	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	0.999
apcA	apcC	sync_2323	sync_2325	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.	0.999
apcA	apcD	sync_2323	sync_1341	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	0.994
apcA	apcE	sync_2323	sync_2321	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	0.998
apcA	cpcA	sync_2323	sync_0488	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338.	0.970
apcA	cpcB	sync_2323	sync_0489	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Phycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01339.	0.959
apcA	cpcG1	sync_2323	sync_2488	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Phycobilisome rod-core linker polypeptide cpcG1; Identified by similarity to SP:P29986; match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.994
apcA	cpcS-4	sync_2323	sync_2487	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.	0.888
apcA	psbV	sync_2323	sync_2250	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Cytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II.	0.856
apcB-1	apcA	sync_1567	sync_2323	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502.	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	0.995
apcB-1	apcB-2	sync_1567	sync_2324	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502.	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	0.995
apcB-1	apcC	sync_1567	sync_2325	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502.	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.	0.999
apcB-1	apcD	sync_1567	sync_1341	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502.	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	0.997
apcB-1	apcE	sync_1567	sync_2321	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502.	Anchor polypeptide LCM; Identified by match to protein family HMM PF00427; match to protein family HMM PF00502; Belongs to the phycobilisome linker protein family.	0.999
apcB-1	cpcA	sync_1567	sync_0488	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502.	Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338.	0.971
apcB-1	cpcB	sync_1567	sync_0489	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502.	Phycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01339.	0.957
apcB-1	cpcG1	sync_1567	sync_2488	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502.	Phycobilisome rod-core linker polypeptide cpcG1; Identified by similarity to SP:P29986; match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.	0.993
apcB-1	cpcS-4	sync_1567	sync_2487	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502.	Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.	0.878
apcB-1	psbV	sync_1567	sync_2250	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502.	Cytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II.	0.886