umuD protein (Synechococcus sp. CC9311) - STRING interaction network

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Score

umuD

Contains: UmuD' protein; identified by match to protein family HMM PF00717; Belongs to the peptidase S24 family. (147 aa)

Predicted Functional Partners:

umuC

0.988

recA

0.942

recN

0.488

sync_1605

0.463

cinA

0.404

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cinA	recA	sync_0302	sync_0443	Identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; Belongs to the CinA family.	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.697
cinA	recN	sync_0302	sync_2940	Identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; Belongs to the CinA family.	DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.	0.566
cinA	umuC	sync_0302	sync_1607	Identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; Belongs to the CinA family.	UmuC protein; Identified by match to protein family HMM PF00817.	0.417
cinA	umuD	sync_0302	sync_1606	Identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; Belongs to the CinA family.	Contains: UmuD' protein; identified by match to protein family HMM PF00717; Belongs to the peptidase S24 family.	0.404
recA	cinA	sync_0443	sync_0302	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	Identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; Belongs to the CinA family.	0.697
recA	recN	sync_0443	sync_2940	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.	0.781
recA	umuC	sync_0443	sync_1607	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	UmuC protein; Identified by match to protein family HMM PF00817.	0.823
recA	umuD	sync_0443	sync_1606	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	Contains: UmuD' protein; identified by match to protein family HMM PF00717; Belongs to the peptidase S24 family.	0.942
recN	cinA	sync_2940	sync_0302	DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.	Identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; Belongs to the CinA family.	0.566
recN	recA	sync_2940	sync_0443	DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.781
recN	umuC	sync_2940	sync_1607	DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.	UmuC protein; Identified by match to protein family HMM PF00817.	0.478
recN	umuD	sync_2940	sync_1606	DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.	Contains: UmuD' protein; identified by match to protein family HMM PF00717; Belongs to the peptidase S24 family.	0.488
sync_1605	umuC	sync_1605	sync_1607	Hypothetical protein; Identified by Glimmer2; putative.	UmuC protein; Identified by match to protein family HMM PF00817.	0.439
sync_1605	umuD	sync_1605	sync_1606	Hypothetical protein; Identified by Glimmer2; putative.	Contains: UmuD' protein; identified by match to protein family HMM PF00717; Belongs to the peptidase S24 family.	0.463
umuC	cinA	sync_1607	sync_0302	UmuC protein; Identified by match to protein family HMM PF00817.	Identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; Belongs to the CinA family.	0.417
umuC	recA	sync_1607	sync_0443	UmuC protein; Identified by match to protein family HMM PF00817.	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.823
umuC	recN	sync_1607	sync_2940	UmuC protein; Identified by match to protein family HMM PF00817.	DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.	0.478
umuC	sync_1605	sync_1607	sync_1605	UmuC protein; Identified by match to protein family HMM PF00817.	Hypothetical protein; Identified by Glimmer2; putative.	0.439
umuC	umuD	sync_1607	sync_1606	UmuC protein; Identified by match to protein family HMM PF00817.	Contains: UmuD' protein; identified by match to protein family HMM PF00717; Belongs to the peptidase S24 family.	0.988
umuD	cinA	sync_1606	sync_0302	Contains: UmuD' protein; identified by match to protein family HMM PF00717; Belongs to the peptidase S24 family.	Identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; Belongs to the CinA family.	0.404