sync_1629 protein (Synechococcus sp. CC9311)

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Score

sync_1629

Conserved hypothetical protein; Identified by similarity to GB:CAE07548.1. (136 aa)

Predicted Functional Partners:

sync_0240

0.789

sync_2096

0.772

sync_1555

0.770

sync_1994

0.770

psbO

0.768

psb27

0.767

psbW

0.766

sync_2460

0.764

psaL

0.762

sync_1039

0.762

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
psaL	psb27	sync_0398	sync_2022	Photosystem I reaction center subunit XI; Identified by match to protein family HMM PF02605.	Possible photosystem II Psb27 protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.	0.771
psaL	psbO	sync_0398	sync_0353	Photosystem I reaction center subunit XI; Identified by match to protein family HMM PF02605.	Photosystem II manganese-stabilizing protein; Identified by match to protein family HMM PF01716.	0.875
psaL	psbW	sync_0398	sync_1583	Photosystem I reaction center subunit XI; Identified by match to protein family HMM PF02605.	Photosystem II reaction center protein PsbW; Identified by match to protein family HMM PF03912; match to protein family HMM TIGR03047; Belongs to the Psb28 family.	0.896
psaL	sync_0240	sync_0398	sync_0240	Photosystem I reaction center subunit XI; Identified by match to protein family HMM PF02605.	Photosystem II stability/assembly factor HCF136; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.	0.608
psaL	sync_1039	sync_0398	sync_1039	Photosystem I reaction center subunit XI; Identified by match to protein family HMM PF02605.	PsbP; Identified by match to protein family HMM PF01789.	0.753
psaL	sync_1555	sync_0398	sync_1555	Photosystem I reaction center subunit XI; Identified by match to protein family HMM PF02605.	Conserved hypothetical protein; Identified by similarity to GB:CAE20563.1; match to protein family HMM PF07082.	0.761
psaL	sync_1629	sync_0398	sync_1629	Photosystem I reaction center subunit XI; Identified by match to protein family HMM PF02605.	Conserved hypothetical protein; Identified by similarity to GB:CAE07548.1.	0.762
psaL	sync_1994	sync_0398	sync_1994	Photosystem I reaction center subunit XI; Identified by match to protein family HMM PF02605.	Identified by match to protein family HMM PF06485.	0.768
psaL	sync_2096	sync_0398	sync_2096	Photosystem I reaction center subunit XI; Identified by match to protein family HMM PF02605.	Conserved hypothetical protein.	0.745
psaL	sync_2460	sync_0398	sync_2460	Photosystem I reaction center subunit XI; Identified by match to protein family HMM PF02605.	Conserved hypothetical protein; Identified by similarity to GB:CAE06850.1; match to protein family HMM PF02325.	0.687
psb27	psaL	sync_2022	sync_0398	Possible photosystem II Psb27 protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.	Photosystem I reaction center subunit XI; Identified by match to protein family HMM PF02605.	0.771
psb27	psbO	sync_2022	sync_0353	Possible photosystem II Psb27 protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.	Photosystem II manganese-stabilizing protein; Identified by match to protein family HMM PF01716.	0.930
psb27	psbW	sync_2022	sync_1583	Possible photosystem II Psb27 protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.	Photosystem II reaction center protein PsbW; Identified by match to protein family HMM PF03912; match to protein family HMM TIGR03047; Belongs to the Psb28 family.	0.979
psb27	sync_0240	sync_2022	sync_0240	Possible photosystem II Psb27 protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.	Photosystem II stability/assembly factor HCF136; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.	0.804
psb27	sync_1039	sync_2022	sync_1039	Possible photosystem II Psb27 protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.	PsbP; Identified by match to protein family HMM PF01789.	0.888
psb27	sync_1555	sync_2022	sync_1555	Possible photosystem II Psb27 protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.	Conserved hypothetical protein; Identified by similarity to GB:CAE20563.1; match to protein family HMM PF07082.	0.771
psb27	sync_1629	sync_2022	sync_1629	Possible photosystem II Psb27 protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.	Conserved hypothetical protein; Identified by similarity to GB:CAE07548.1.	0.767
psb27	sync_1994	sync_2022	sync_1994	Possible photosystem II Psb27 protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.	Identified by match to protein family HMM PF06485.	0.733
psb27	sync_2096	sync_2022	sync_2096	Possible photosystem II Psb27 protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.	Conserved hypothetical protein.	0.770
psb27	sync_2460	sync_2022	sync_2460	Possible photosystem II Psb27 protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.	Conserved hypothetical protein; Identified by similarity to GB:CAE06850.1; match to protein family HMM PF02325.	0.717