sync_1635 protein (Synechococcus sp. CC9311)

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sync_1635

STAS domain protein; Identified by match to protein family HMM PF01740; Belongs to the anti-sigma-factor antagonist family. (99 aa)

Predicted Functional Partners:

pmgA

0.990

sync_0012

0.921

sync_1343

0.889

mkl

0.880

sync_2196

0.865

sync_0247

0.855

sync_2671

0.843

mrnC

0.812

sync_1633

0.803

sync_1639

0.772

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
mkl	sync_0247	sync_0246	sync_0247	Possible ABC transporter, ATP-binding component; Identified by match to protein family HMM PF00005.	Possible ABC transporter.	0.996
mkl	sync_1635	sync_0246	sync_1635	Possible ABC transporter, ATP-binding component; Identified by match to protein family HMM PF00005.	STAS domain protein; Identified by match to protein family HMM PF01740; Belongs to the anti-sigma-factor antagonist family.	0.880
mkl	sync_2196	sync_0246	sync_2196	Possible ABC transporter, ATP-binding component; Identified by match to protein family HMM PF00005.	Possible transporter, membrane component; Identified by match to protein family HMM PF02405.	0.998
mrnC	sync_1633	sync_1634	sync_1633	Putative RNase3 domain; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.874
mrnC	sync_1635	sync_1634	sync_1635	Putative RNase3 domain; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	STAS domain protein; Identified by match to protein family HMM PF01740; Belongs to the anti-sigma-factor antagonist family.	0.812
pmgA	sync_0012	sync_1580	sync_0012	pmgA protein; Identified by similarity to GB:BAA20429.1.	SpoIIE domain protein; Identified by match to protein family HMM PF07228.	0.965
pmgA	sync_1635	sync_1580	sync_1635	pmgA protein; Identified by similarity to GB:BAA20429.1.	STAS domain protein; Identified by match to protein family HMM PF01740; Belongs to the anti-sigma-factor antagonist family.	0.990
pmgA	sync_2671	sync_1580	sync_2671	pmgA protein; Identified by similarity to GB:BAA20429.1.	Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.877
sync_0012	pmgA	sync_0012	sync_1580	SpoIIE domain protein; Identified by match to protein family HMM PF07228.	pmgA protein; Identified by similarity to GB:BAA20429.1.	0.965
sync_0012	sync_1635	sync_0012	sync_1635	SpoIIE domain protein; Identified by match to protein family HMM PF07228.	STAS domain protein; Identified by match to protein family HMM PF01740; Belongs to the anti-sigma-factor antagonist family.	0.921
sync_0012	sync_2671	sync_0012	sync_2671	SpoIIE domain protein; Identified by match to protein family HMM PF07228.	Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.878
sync_0247	mkl	sync_0247	sync_0246	Possible ABC transporter.	Possible ABC transporter, ATP-binding component; Identified by match to protein family HMM PF00005.	0.996
sync_0247	sync_1635	sync_0247	sync_1635	Possible ABC transporter.	STAS domain protein; Identified by match to protein family HMM PF01740; Belongs to the anti-sigma-factor antagonist family.	0.855
sync_0247	sync_2196	sync_0247	sync_2196	Possible ABC transporter.	Possible transporter, membrane component; Identified by match to protein family HMM PF02405.	0.991
sync_1343	sync_1635	sync_1343	sync_1635	Conserved hypothetical protein; Identified by similarity to GB:CAE20910.1.	STAS domain protein; Identified by match to protein family HMM PF01740; Belongs to the anti-sigma-factor antagonist family.	0.889
sync_1343	sync_2671	sync_1343	sync_2671	Conserved hypothetical protein; Identified by similarity to GB:CAE20910.1.	Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.436
sync_1633	mrnC	sync_1633	sync_1634	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Putative RNase3 domain; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.874
sync_1633	sync_1635	sync_1633	sync_1635	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	STAS domain protein; Identified by match to protein family HMM PF01740; Belongs to the anti-sigma-factor antagonist family.	0.803
sync_1635	mkl	sync_1635	sync_0246	STAS domain protein; Identified by match to protein family HMM PF01740; Belongs to the anti-sigma-factor antagonist family.	Possible ABC transporter, ATP-binding component; Identified by match to protein family HMM PF00005.	0.880
sync_1635	mrnC	sync_1635	sync_1634	STAS domain protein; Identified by match to protein family HMM PF01740; Belongs to the anti-sigma-factor antagonist family.	Putative RNase3 domain; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.812